Difference between revisions of "RXN-12399"
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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN66-281 RXN66-281] == * direction: ** left-to-right * common-name: ** squalene synthase ** farnes...") |
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=4-HYDROXY-2-KETOPIMELATE-LYSIS-RXN 4-HYDROXY-2-KETOPIMELATE-LYSIS-RXN] == * direction: ** left-to-r...") |
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| Line 1: | Line 1: | ||
[[Category:reaction]] | [[Category:reaction]] | ||
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object= | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=4-HYDROXY-2-KETOPIMELATE-LYSIS-RXN 4-HYDROXY-2-KETOPIMELATE-LYSIS-RXN] == |
* direction: | * direction: | ||
** left-to-right | ** left-to-right | ||
| − | * | + | * ec-number: |
| − | ** | + | ** [http://enzyme.expasy.org/EC/4.1.2.52 ec-4.1.2.52] |
| − | |||
| − | |||
== Reaction formula == | == Reaction formula == | ||
| − | * 1 [[CPD- | + | * 1 [[CPD-804]][c] '''=>''' 1 [[PYRUVATE]][c] '''+''' 1 [[SUCC-S-ALD]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
| − | * Gene: [[ | + | * Gene: [[SJ06446]] |
| − | |||
| − | |||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
| + | *** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
| − | |||
| − | |||
| − | |||
== Pathway(s) == | == Pathway(s) == | ||
| + | * [[3-HYDROXYPHENYLACETATE-DEGRADATION-PWY]], 4-hydroxyphenylacetate degradation: [http://metacyc.org/META/NEW-IMAGE?object=3-HYDROXYPHENYLACETATE-DEGRADATION-PWY 3-HYDROXYPHENYLACETATE-DEGRADATION-PWY] | ||
| + | ** '''2''' reactions found over '''8''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
| − | |||
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
| + | * category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a | ||
== External links == | == External links == | ||
| + | * RHEA: | ||
| + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25789 25789] | ||
* LIGAND-RXN: | * LIGAND-RXN: | ||
| − | ** [http://www.genome.jp/dbget-bin/www_bget? | + | ** [http://www.genome.jp/dbget-bin/www_bget?R01647 R01647] |
| + | ** [http://www.genome.jp/dbget-bin/www_bget?R01645 R01645] | ||
{{#set: direction=left-to-right}} | {{#set: direction=left-to-right}} | ||
| − | {{#set: | + | {{#set: ec-number=ec-4.1.2.52}} |
| − | {{#set: nb gene associated= | + | {{#set: nb gene associated=1}} |
| − | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=1}} |
| − | {{#set: reconstruction category=orthology | + | {{#set: reconstruction category=orthology}} |
| − | {{#set: reconstruction tool=pantograph | + | {{#set: reconstruction tool=pantograph}} |
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
| − | {{#set: reconstruction source= | + | {{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|output_pantograph_arabidopsis_thaliana}} |
Revision as of 09:31, 27 August 2019
Contents
Reaction 4-HYDROXY-2-KETOPIMELATE-LYSIS-RXN
- direction:
- left-to-right
- ec-number:
Reaction formula
- 1 CPD-804[c] => 1 PYRUVATE[c] + 1 SUCC-S-ALD[c]
Gene(s) associated with this reaction
- Gene: SJ06446
- Category: orthology
- Source: output_pantograph_arabidopsis_thaliana, Tool: pantograph, Assignment: n.a, Comment: n.a
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: orthology
Pathway(s)
- 3-HYDROXYPHENYLACETATE-DEGRADATION-PWY, 4-hydroxyphenylacetate degradation: 3-HYDROXYPHENYLACETATE-DEGRADATION-PWY
- 2 reactions found over 8 reactions in the full pathway
Reconstruction information
- category: orthology; source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- category: orthology; source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
External links
