Difference between revisions of "RXN-12440"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction RIBOFLAVINKIN-RXN == * direction: ** left-to-right * common-name: ** riboflavin kinase * ec-number: ** [http://enzyme.expasy.org/EC/2.7.1.26...")
(Created page with "Category:reaction == Reaction RXN-12440 == * direction: ** left-to-right * common-name: ** l-ascorbate peroxidase * ec-number: ** [http://enzyme.expasy.org/EC/1.11.1.11 ec...")
 
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RIBOFLAVINKIN-RXN ==
+
== Reaction RXN-12440 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** riboflavin kinase
+
** l-ascorbate peroxidase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.7.1.26 ec-2.7.1.26]
+
** [http://enzyme.expasy.org/EC/1.11.1.11 ec-1.11.1.11]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ATP]][c] '''+''' 1 [[RIBOFLAVIN]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[FMN]][c] '''+''' 1 [[PROTON]][c]
+
* 2 [[ASCORBATE]][c] '''+''' 1 [[HYDROGEN-PEROXIDE]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[ASCORBATE]][c] '''+''' 1 [[L-DEHYDRO-ASCORBATE]][c] '''+''' 2 [[WATER]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ19426]]
+
* Gene: [[SJ14435]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ07922]]
+
* Gene: [[SJ16420]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ01760]]
+
* Gene: [[SJ04585]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ17253]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[RIBOSYN2-PWY]], flavin biosynthesis I (bacteria and plants):
+
* [[PWY-6959]], L-ascorbate degradation V:
−
** '''8''' reactions found over '''9''' reactions in the full pathway
+
** '''1''' reactions found over '''5''' reactions in the full pathway
−
* [[PWY66-366]], flavin salvage:
+
* [[PWY-6960]], L-ascorbate degradation III:
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
** '''1''' reactions found over '''6''' reactions in the full pathway
−
* [[PWY-7863]], roseoflavin biosynthesis:
+
* [[PWY-6961]], L-ascorbate degradation II (bacterial, aerobic):
 
** '''1''' reactions found over '''7''' reactions in the full pathway
 
** '''1''' reactions found over '''7''' reactions in the full pathway
−
* [[PWY-5523]], 5,6-dimethylbenzimidazole biosynthesis I (aerobic):
 
−
** '''1''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-6168]], flavin biosynthesis III (fungi):
 
−
** '''7''' reactions found over '''9''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
+
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
* METANETX-RXN : MNXR103429
+
* METANETX-RXN : MNXR140261
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14358 14358]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22997 22997]
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R00549 R00549]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/Q9JVY5 Q9JVY5]
 
−
** [http://www.uniprot.org/uniprot/Q9PHS7 Q9PHS7]
 
−
** [http://www.uniprot.org/uniprot/Q59263 Q59263]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=riboflavin kinase}}
+
{{#set: common-name=l-ascorbate peroxidase}}
−
{{#set: ec-number=ec-2.7.1.26}}
+
{{#set: ec-number=ec-1.11.1.11}}
−
{{#set: nb gene associated=3}}
+
{{#set: nb gene associated=4}}
−
{{#set: nb pathway associated=5}}
+
{{#set: nb pathway associated=3}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Latest revision as of 11:23, 18 March 2021

Reaction RXN-12440

  • direction:
    • left-to-right
  • common-name:
    • l-ascorbate peroxidase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6959, L-ascorbate degradation V:
    • 1 reactions found over 5 reactions in the full pathway
  • PWY-6960, L-ascorbate degradation III:
    • 1 reactions found over 6 reactions in the full pathway
  • PWY-6961, L-ascorbate degradation II (bacterial, aerobic):
    • 1 reactions found over 7 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR140261
  • RHEA:





Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=RXN-12440&oldid=142475"