Difference between revisions of "RXN-12445"

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(Created page with "Category:reaction == Reaction RXN-9657 == * direction: ** left-to-right * common-name: ** crotonyl-[acp] reductase ** crotonyl-[acyl-carrier-protein] reductase * ec-number...")
(Created page with "Category:reaction == Reaction RXN0-1863 == * direction: ** reversible * common-name: ** udp-l-ara4o c-4" transaminase * ec-number: ** [http://enzyme.expasy.org/EC/2.6.1.92...")
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction RXN-9657 ==
+
== Reaction RXN0-1863 ==
 
* direction:
 
* direction:
** left-to-right
+
** reversible
 
* common-name:
 
* common-name:
** crotonyl-[acp] reductase
+
** udp-l-ara4o c-4" transaminase
** crotonyl-[acyl-carrier-protein] reductase
 
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/1.3.1.9 ec-1.3.1.9]
+
** [http://enzyme.expasy.org/EC/2.6.1.92 ec-2.6.1.92]
 +
** [http://enzyme.expasy.org/EC/2.6.1.87 ec-2.6.1.87]
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[Crotonyl-ACPs]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[Butanoyl-ACPs]][c] '''+''' 1 [[NAD]][c]
+
* 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[UDP-4-AMINO-4-DEOXY-L-ARABINOSE]][c] '''<=>''' 1 [[5-BETA-L-THREO-PENTAPYRANOSYL-4-ULOSE-]][c] '''+''' 1 [[GLT]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ03883]]
+
* Gene: [[SJ12040]]
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
* Gene: [[SJ00320]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY-5971]], palmitate biosynthesis II (bacteria and plant cytoplasm):
+
* [[PWY0-1338]], polymyxin resistance:
** '''31''' reactions found over '''31''' reactions in the full pathway
+
** '''1''' reactions found over '''6''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
{{#set: direction=left-to-right}}
+
* RHEA:
{{#set: common-name=crotonyl-[acp] reductase|crotonyl-[acyl-carrier-protein] reductase}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24713 24713]
{{#set: ec-number=ec-1.3.1.9}}
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* LIGAND-RXN:
{{#set: nb gene associated=2}}
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** [http://www.genome.jp/dbget-bin/www_bget?R07659 R07659]
 +
{{#set: direction=reversible}}
 +
{{#set: common-name=udp-l-ara4o c-4" transaminase}}
 +
{{#set: ec-number=ec-2.6.1.92|ec-2.6.1.87}}
 +
{{#set: nb gene associated=1}}
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=annotation}}
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 15:33, 5 January 2021

Reaction RXN0-1863

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY0-1338, polymyxin resistance:
    • 1 reactions found over 6 reactions in the full pathway

Reconstruction information

External links