Difference between revisions of "RXN-12455"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.1.1.64-RXN 2.1.1.64-RXN] == * direction: ** left-to-right * common-name: ** 3-demethylubiquinone-...")
(Created page with "Category:reaction == Reaction RXN-12455 == * direction: ** left-to-right * common-name: ** trna-dihydrouridine17 synthase * ec-number: ** [http://enzyme.expasy.org/EC/1.3....")
 
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.1.1.64-RXN 2.1.1.64-RXN] ==
+
== Reaction RXN-12455 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
** 3-demethylubiquinone-9 3-o-methyltransferase
+
** trna-dihydrouridine17 synthase
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/2.1.1.64 ec-2.1.1.64]
+
** [http://enzyme.expasy.org/EC/1.3.1.88 ec-1.3.1.88]
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[CPD-7158]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[CPD-9957]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[NADH-P-OR-NOP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Uracil17-in-tRNAs]][c] '''=>''' 1 [[56-Dihydrouracil17-in-tRNAs]][c] '''+''' 1 [[NAD-P-OR-NOP]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ16864]]
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* Gene: [[SJ02952]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
* Gene: [[SJ13007]]
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* Gene: [[SJ03254]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY-5856]], ubiquinol-9 biosynthesis (prokaryotic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5856 PWY-5856]
 
** '''3''' reactions found over '''8''' reactions in the full pathway
 
* [[PWY-5871]], ubiquinol-9 biosynthesis (eukaryotic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5871 PWY-5871]
 
** '''3''' reactions found over '''8''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* METANETX-RXN : MNXR117567
 
* RHEA:
 
* RHEA:
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17050 17050]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=53370 53370]
* LIGAND-RXN:
 
** [http://www.genome.jp/dbget-bin/www_bget?R07235 R07235]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: common-name=3-demethylubiquinone-9 3-o-methyltransferase}}
+
{{#set: common-name=trna-dihydrouridine17 synthase}}
{{#set: ec-number=ec-2.1.1.64}}
+
{{#set: ec-number=ec-1.3.1.88}}
 
{{#set: nb gene associated=2}}
 
{{#set: nb gene associated=2}}
{{#set: nb pathway associated=2}}
+
{{#set: nb pathway associated=0}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}

Latest revision as of 11:20, 18 March 2021

Reaction RXN-12455

  • direction:
    • left-to-right
  • common-name:
    • trna-dihydrouridine17 synthase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

  • METANETX-RXN : MNXR117567
  • RHEA: