Difference between revisions of "RXN-12457"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=XANTHOSINEPHOSPHORY-RXN XANTHOSINEPHOSPHORY-RXN] == * direction: ** left-to-right * common-name: **...")
 
(Created page with "Category:reaction == Reaction RXN-12457 == * direction: ** left-to-right * common-name: ** trna-dihydrouridine47 synthase * ec-number: ** [http://enzyme.expasy.org/EC/1.3....")
 
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=XANTHOSINEPHOSPHORY-RXN XANTHOSINEPHOSPHORY-RXN] ==
+
== Reaction RXN-12457 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
** xanthosine phosphorylase
+
** trna-dihydrouridine47 synthase
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/2.4.2.1 ec-2.4.2.1]
+
** [http://enzyme.expasy.org/EC/1.3.1.89 ec-1.3.1.89]
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[Pi]][c] '''+''' 1 [[XANTHOSINE]][c] '''=>''' 1 [[RIBOSE-1P]][c] '''+''' 1 [[XANTHINE]][c]
+
* 1 [[NADH-P-OR-NOP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Uracil47-in-tRNAs]][c] '''=>''' 1 [[56-Dihydrouracil47-in-tRNAs]][c] '''+''' 1 [[NAD-P-OR-NOP]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ03195]]
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* Gene: [[SJ07722]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY-5695]], inosine 5'-phosphate degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5695 PWY-5695]
 
** '''4''' reactions found over '''4''' reactions in the full pathway
 
* [[SALVPURINE2-PWY]], xanthine and xanthosine salvage: [http://metacyc.org/META/NEW-IMAGE?object=SALVPURINE2-PWY SALVPURINE2-PWY]
 
** '''1''' reactions found over '''2''' reactions in the full pathway
 
* [[PWY0-1296]], purine ribonucleosides degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1296 PWY0-1296]
 
** '''6''' reactions found over '''6''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* METANETX-RXN : MNXR117569
 
* RHEA:
 
* RHEA:
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27639 27639]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=53362 53362]
* LIGAND-RXN:
 
** [http://www.genome.jp/dbget-bin/www_bget?R02297 R02297]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: common-name=xanthosine phosphorylase}}
+
{{#set: common-name=trna-dihydrouridine47 synthase}}
{{#set: ec-number=ec-2.4.2.1}}
+
{{#set: ec-number=ec-1.3.1.89}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
{{#set: nb pathway associated=3}}
+
{{#set: nb pathway associated=0}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}

Latest revision as of 11:19, 18 March 2021

Reaction RXN-12457

  • direction:
    • left-to-right
  • common-name:
    • trna-dihydrouridine47 synthase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

  • METANETX-RXN : MNXR117569
  • RHEA: