Difference between revisions of "RXN-12460"
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(Created page with "Category:pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7376 PWY-7376] == * taxonomic-range: ** [http://metacyc.org/META/NEW-IMAGE?object=tax-2 tax-2] **...") |
(Created page with "Category:reaction == Reaction RXN-12460 == * direction: ** left-to-right * common-name: ** l-asparaginyl-trnaasn hydrolase ** aminoacyl-trna hydrolase * ec-number: ** [htt...") |
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| − | [[Category: | + | [[Category:reaction]] |
| − | == | + | == Reaction RXN-12460 == |
| − | * | + | * direction: |
| − | ** | + | ** left-to-right |
| − | |||
* common-name: | * common-name: | ||
| − | ** | + | ** l-asparaginyl-trnaasn hydrolase |
| − | + | ** aminoacyl-trna hydrolase | |
| − | * | + | * ec-number: |
| − | * | + | ** [http://enzyme.expasy.org/EC/3.1.1.29 ec-3.1.1.29] |
| − | + | == Reaction formula == | |
| − | * [http:// | + | * 1 [[Charged-ASN-tRNAs]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[ASN]][c] '''+''' 1 [[ASN-tRNAs]][c] '''+''' 1 [[PROTON]][c] |
| − | * [ | + | == Gene(s) associated with this reaction == |
| − | * [ | + | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> |
| − | * [ | + | * Gene: [[SJ00680]] |
| − | * [ | + | ** Category: [[annotation]] |
| − | * [ | + | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a |
| − | * [ | + | ** Category: [[orthology]] |
| − | * [ | + | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a |
| − | * [ | + | * Gene: [[SJ09079]] |
| − | * [ | + | ** Category: [[annotation]] |
| − | * [ | + | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a |
| − | {{#set: | + | * Gene: [[SJ05960]] |
| − | {{#set: | + | ** Category: [[annotation]] |
| − | {{#set: nb | + | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a |
| − | {{#set: | + | * Gene: [[SJ02121]] |
| − | {{#set: | + | ** Category: [[annotation]] |
| + | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
| + | ** Category: [[orthology]] | ||
| + | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
| + | * Gene: [[SJ03879]] | ||
| + | ** Category: [[annotation]] | ||
| + | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
| + | ** Category: [[orthology]] | ||
| + | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
| + | </div> | ||
| + | == Pathway(s) == | ||
| + | * [[PWY490-4]], L-asparagine biosynthesis III (tRNA-dependent): | ||
| + | ** '''2''' reactions found over '''4''' reactions in the full pathway | ||
| + | == Reconstruction information == | ||
| + | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
| + | == External links == | ||
| + | * METANETX-RXN : MNXR117572 | ||
| + | {{#set: direction=left-to-right}} | ||
| + | {{#set: common-name=aminoacyl-trna hydrolase|l-asparaginyl-trnaasn hydrolase}} | ||
| + | {{#set: ec-number=ec-3.1.1.29}} | ||
| + | {{#set: nb gene associated=5}} | ||
| + | {{#set: nb pathway associated=1}} | ||
| + | {{#set: reconstruction category=orthology|annotation}} | ||
| + | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
| + | {{#set: reconstruction comment=n.a}} | ||
| + | {{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}} | ||
Latest revision as of 11:22, 18 March 2021
Contents
Reaction RXN-12460
- direction:
- left-to-right
- common-name:
- l-asparaginyl-trnaasn hydrolase
- aminoacyl-trna hydrolase
- ec-number:
Reaction formula
- 1 Charged-ASN-tRNAs[c] + 1 WATER[c] => 1 ASN[c] + 1 ASN-tRNAs[c] + 1 PROTON[c]
Gene(s) associated with this reaction
- Gene: SJ00680
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: SJ09079
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: SJ05960
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: annotation
- Gene: SJ02121
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: SJ03879
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
Pathway(s)
- PWY490-4, L-asparagine biosynthesis III (tRNA-dependent):
- 2 reactions found over 4 reactions in the full pathway
Reconstruction information
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- category: orthology; source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
External links
- METANETX-RXN : MNXR117572
