Difference between revisions of "RXN-12507"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=4.1.99.4-RXN 4.1.99.4-RXN] == * direction: ** left-to-right * common-name: ** 1-aminocyclopropane-1...")
 
(Created page with "Category:reaction == Reaction RXN-12507 == * direction: ** left-to-right == Reaction formula == * 1 CPD0-2171[c] '''+''' 1 NAD[c] '''=>''' 1 CPD-10284[c] '''+'...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=4.1.99.4-RXN 4.1.99.4-RXN] ==
+
== Reaction RXN-12507 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
−
* common-name:
 
−
** 1-aminocyclopropane-1-carboxylate deaminase
 
−
* ec-number:
 
−
** [http://enzyme.expasy.org/EC/3.5.99.7 ec-3.5.99.7]
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CPD-68]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[2-OXOBUTANOATE]][c] '''+''' 1 [[AMMONIUM]][c]
+
* 1 [[CPD0-2171]][c] '''+''' 1 [[NAD]][c] '''=>''' 1 [[CPD-10284]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ20325]]
+
* Gene: [[SJ03584]]
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ21390]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ07211]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-7654]], (8E,10E)-dodeca-8,10-dienol biosynthesis:
 +
** '''5''' reactions found over '''11''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* METANETX-RXN : MNXR100547
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16934 16934]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=31168 31168]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00997 R00997]
+
** [http://www.genome.jp/dbget-bin/www_bget?R04739 R04739]
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/Q9V2L2 Q9V2L2]
 
−
** [http://www.uniprot.org/uniprot/Q9WY68 Q9WY68]
 
−
** [http://www.uniprot.org/uniprot/P30297 P30297]
 
−
** [http://www.uniprot.org/uniprot/Q7M523 Q7M523]
 
−
** [http://www.uniprot.org/uniprot/Q9URX3 Q9URX3]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=1-aminocyclopropane-1-carboxylate deaminase}}
+
{{#set: nb gene associated=3}}
−
{{#set: ec-number=ec-3.5.99.7}}
+
{{#set: nb pathway associated=1}}
−
{{#set: nb gene associated=1}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: nb pathway associated=0}}
+
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction category=orthology|annotation}}
 
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|output_pantograph_ectocarpus_siliculosus|output_pantograph_arabidopsis_thaliana}}

Latest revision as of 11:19, 18 March 2021

Reaction RXN-12507

  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7654, (8E,10E)-dodeca-8,10-dienol biosynthesis:
    • 5 reactions found over 11 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR100547
  • RHEA:
  • LIGAND-RXN:




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