Difference between revisions of "RXN-12510"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8327 RXN-8327] == * direction: ** left-to-right * common-name: ** 1-18:1-2-18:1-phosphatidylcho...")
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=URATE-OXIDASE-RXN URATE-OXIDASE-RXN] == * direction: ** left-to-right * common-name: ** factor-inde...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8327 RXN-8327] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=URATE-OXIDASE-RXN URATE-OXIDASE-RXN] ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** 1-18:1-2-18:1-phosphatidylcholine 2-12-desaturase
+
** factor-independent urate hydroxylase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.14.19.22 ec-1.14.19.22]
+
** [http://enzyme.expasy.org/EC/1.7.3.3 ec-1.7.3.3]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CPD-2181]][c] '''+''' 2 [[FERROCYTOCHROME-B5]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 2 [[PROTON]][c] '''=>''' 1 [[CPD-8091]][c] '''+''' 2 [[FERRICYTOCHROME-B5]][c] '''+''' 2 [[WATER]][c]
+
* 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[URATE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[5-HYDROXYISOURATE]][c] '''+''' 1 [[HYDROGEN-PEROXIDE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ00667]]
+
* Gene: [[SJ19970]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ00979]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-762]], phospholipid desaturation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-762 PWY-762]
+
* [[PWY-5691]], urate conversion to allantoin I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5691 PWY-5691]
−
** '''19''' reactions found over '''21''' reactions in the full pathway
+
** '''3''' reactions found over '''3''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21369 21369]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R02106 R02106]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P04670 P04670]
 +
** [http://www.uniprot.org/uniprot/P16163 P16163]
 +
** [http://www.uniprot.org/uniprot/Q00511 Q00511]
 +
** [http://www.uniprot.org/uniprot/P33282 P33282]
 +
** [http://www.uniprot.org/uniprot/P25688 P25688]
 +
** [http://www.uniprot.org/uniprot/P16164 P16164]
 +
** [http://www.uniprot.org/uniprot/Q45697 Q45697]
 +
** [http://www.uniprot.org/uniprot/P78609 P78609]
 +
** [http://www.uniprot.org/uniprot/P09118 P09118]
 +
** [http://www.uniprot.org/uniprot/P11645 P11645]
 +
** [http://www.uniprot.org/uniprot/P23194 P23194]
 +
** [http://www.uniprot.org/uniprot/P34799 P34799]
 +
** [http://www.uniprot.org/uniprot/P34798 P34798]
 +
** [http://www.uniprot.org/uniprot/P53763 P53763]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=1-18:1-2-18:1-phosphatidylcholine 2-12-desaturase}}
+
{{#set: common-name=factor-independent urate hydroxylase}}
−
{{#set: ec-number=ec-1.14.19.22}}
+
{{#set: ec-number=ec-1.7.3.3}}
−
{{#set: nb gene associated=1}}
+
{{#set: nb gene associated=2}}
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=annotation|orthology}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome|output_pantograph_nannochloropsis_salina}}

Revision as of 09:32, 27 August 2019

Reaction URATE-OXIDASE-RXN

  • direction:
    • left-to-right
  • common-name:
    • factor-independent urate hydroxylase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-5691, urate conversion to allantoin I: PWY-5691
    • 3 reactions found over 3 reactions in the full pathway

Reconstruction information

External links





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