Difference between revisions of "RXN-12510"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=URATE-OXIDASE-RXN URATE-OXIDASE-RXN] == * direction: ** left-to-right * common-name: ** factor-inde...")
(Created page with "Category:reaction == Reaction 3.4.11.18-RXN == * direction: ** left-to-right * common-name: ** methionine aminopeptidase * ec-number: ** [http://enzyme.expasy.org/EC/3.4.1...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=URATE-OXIDASE-RXN URATE-OXIDASE-RXN] ==
+
== Reaction 3.4.11.18-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** factor-independent urate hydroxylase
+
** methionine aminopeptidase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.7.3.3 ec-1.7.3.3]
+
** [http://enzyme.expasy.org/EC/3.4.11.18 ec-3.4.11.18]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[URATE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[5-HYDROXYISOURATE]][c] '''+''' 1 [[HYDROGEN-PEROXIDE]][c]
+
* 1 [[Protein-With-N-Terminal-Met]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[MET]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Peptides-holder]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ19970]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* Gene: [[SJ01604]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ16939]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ00979]]
+
* Gene: [[SJ16932]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ16573]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ02903]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ18138]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
</div>
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-5691]], urate conversion to allantoin I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5691 PWY-5691]
 
−
** '''3''' reactions found over '''3''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21369 21369]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R02106 R02106]
 
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P04670 P04670]
+
** [http://www.uniprot.org/uniprot/P38062 P38062]
−
** [http://www.uniprot.org/uniprot/P16163 P16163]
+
** [http://www.uniprot.org/uniprot/P47418 P47418]
−
** [http://www.uniprot.org/uniprot/Q00511 Q00511]
+
** [http://www.uniprot.org/uniprot/Q9PM25 Q9PM25]
−
** [http://www.uniprot.org/uniprot/P33282 P33282]
+
** [http://www.uniprot.org/uniprot/P28617 P28617]
−
** [http://www.uniprot.org/uniprot/P25688 P25688]
+
** [http://www.uniprot.org/uniprot/P44421 P44421]
−
** [http://www.uniprot.org/uniprot/P16164 P16164]
+
** [http://www.uniprot.org/uniprot/Q9UYT4 Q9UYT4]
−
** [http://www.uniprot.org/uniprot/Q45697 Q45697]
+
** [http://www.uniprot.org/uniprot/P0AE18 P0AE18]
−
** [http://www.uniprot.org/uniprot/P78609 P78609]
+
** [http://www.uniprot.org/uniprot/P50579 P50579]
−
** [http://www.uniprot.org/uniprot/P09118 P09118]
+
** [http://www.uniprot.org/uniprot/Q9JWK1 Q9JWK1]
−
** [http://www.uniprot.org/uniprot/P11645 P11645]
+
** [http://www.uniprot.org/uniprot/Q58725 Q58725]
−
** [http://www.uniprot.org/uniprot/P23194 P23194]
+
** [http://www.uniprot.org/uniprot/P56218 P56218]
−
** [http://www.uniprot.org/uniprot/P34799 P34799]
+
** [http://www.uniprot.org/uniprot/P19994 P19994]
−
** [http://www.uniprot.org/uniprot/P34798 P34798]
+
** [http://www.uniprot.org/uniprot/P22624 P22624]
−
** [http://www.uniprot.org/uniprot/P53763 P53763]
+
** [http://www.uniprot.org/uniprot/P0A1X6 P0A1X6]
 +
** [http://www.uniprot.org/uniprot/P41392 P41392]
 +
** [http://www.uniprot.org/uniprot/Q59509 Q59509]
 +
** [http://www.uniprot.org/uniprot/Q01662 Q01662]
 +
** [http://www.uniprot.org/uniprot/P95963 P95963]
 +
** [http://www.uniprot.org/uniprot/P53579 P53579]
 +
** [http://www.uniprot.org/uniprot/P53581 P53581]
 +
** [http://www.uniprot.org/uniprot/P53580 P53580]
 +
** [http://www.uniprot.org/uniprot/Q9FV49 Q9FV49]
 +
** [http://www.uniprot.org/uniprot/Q9Z9J4 Q9Z9J4]
 +
** [http://www.uniprot.org/uniprot/Q9RKR2 Q9RKR2]
 +
</div>
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=factor-independent urate hydroxylase}}
+
{{#set: common-name=methionine aminopeptidase}}
−
{{#set: ec-number=ec-1.7.3.3}}
+
{{#set: ec-number=ec-3.4.11.18}}
−
{{#set: nb gene associated=2}}
+
{{#set: nb gene associated=6}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=0}}
 
{{#set: reconstruction category=annotation|orthology}}
 
{{#set: reconstruction category=annotation|orthology}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome|output_pantograph_nannochloropsis_salina}}
+
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}

Revision as of 20:42, 18 December 2020

Reaction 3.4.11.18-RXN

  • direction:
    • left-to-right
  • common-name:
    • methionine aminopeptidase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links





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