Difference between revisions of "RXN-12518"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.4.1.123-RXN 2.4.1.123-RXN] == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy...")
(Created page with "Category:reaction == Reaction RXN-12518 == * direction: ** left-to-right * common-name: ** fatty-acyl coenzyme a oxidase ** acyl-coa oxidase * ec-number: ** [http://enzyme...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.4.1.123-RXN 2.4.1.123-RXN] ==
+
== Reaction RXN-12518 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 +
* common-name:
 +
** fatty-acyl coenzyme a oxidase
 +
** acyl-coa oxidase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.4.1.123 ec-2.4.1.123]
+
** [http://enzyme.expasy.org/EC/1.3.3.6 ec-1.3.3.6]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CPD-14553]][c] '''+''' 1 [[MYO-INOSITOL]][c] '''=>''' 1 [[CPD-458]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[UDP]][c]
+
* 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[cis-5-enoyl-CoA]][c] '''=>''' 1 [[HYDROGEN-PEROXIDE]][c] '''+''' 1 [[trans-2-cis-5-dienoyl-CoA]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ20314]]
+
* Gene: [[SJ07452]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ19669]]
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ03090]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ13468]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ07451]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-5337]], stachyose biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5337 PWY-5337]
+
* [[PWY-6837]], fatty acid β-oxidation V (unsaturated, odd number, di-isomerase-dependent):
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
** '''4''' reactions found over '''5''' reactions in the full pathway
−
* [[PWY-6524]], lychnose and isolychnose biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6524 PWY-6524]
 
−
** '''2''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-6525]], stellariose and mediose biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6525 PWY-6525]
 
−
** '''2''' reactions found over '''5''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
+
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
* METANETX-RXN : MNXR117603
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12465 12465]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R01192 R01192]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: ec-number=ec-2.4.1.123}}
+
{{#set: common-name=acyl-coa oxidase|fatty-acyl coenzyme a oxidase}}
−
{{#set: nb gene associated=1}}
+
{{#set: ec-number=ec-1.3.3.6}}
−
{{#set: nb pathway associated=3}}
+
{{#set: nb gene associated=5}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Latest revision as of 11:20, 18 March 2021

Reaction RXN-12518

  • direction:
    • left-to-right
  • common-name:
    • fatty-acyl coenzyme a oxidase
    • acyl-coa oxidase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6837, fatty acid β-oxidation V (unsaturated, odd number, di-isomerase-dependent):
    • 4 reactions found over 5 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR117603





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