Difference between revisions of "RXN-12518"
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(Created page with "Category:reaction == Reaction UG4E == * direction: ** reversible * common-name: ** udp-glucose 4-epimerase == Reaction formula == * 1.0 CPD-12575[c] '''<=>''' 1.0 CP...") |
(Created page with "Category:reaction == Reaction PROTEIN-ARGININE-DEIMINASE-RXN == * direction: ** left-to-right * common-name: ** protein-arginine deiminase * ec-number: ** [http://enzyme.e...") |
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Line 1: | Line 1: | ||
[[Category:reaction]] | [[Category:reaction]] | ||
− | == Reaction | + | == Reaction PROTEIN-ARGININE-DEIMINASE-RXN == |
* direction: | * direction: | ||
− | ** | + | ** left-to-right |
* common-name: | * common-name: | ||
− | ** | + | ** protein-arginine deiminase |
+ | * ec-number: | ||
+ | ** [http://enzyme.expasy.org/EC/3.5.3.15 ec-3.5.3.15] | ||
== Reaction formula == | == Reaction formula == | ||
− | * 1 | + | * 1 [[Protein-L-Arginines]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[AMMONIUM]][c] '''+''' 1 [[PROTEIN-L-CITRULLINE]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
− | * Gene: [[ | + | * Gene: [[SJ16434]] |
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a | ||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
− | *** Source: [[ | + | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a |
== Pathway(s) == | == Pathway(s) == | ||
+ | * [[PWY-4921]], protein citrullination: | ||
+ | ** '''1''' reactions found over '''1''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
− | * category: [[orthology]]; source: [[ | + | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a |
+ | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
== External links == | == External links == | ||
− | {{#set: direction= | + | * RHEA: |
− | {{#set: common-name= | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18090 18090] |
+ | * LIGAND-RXN: | ||
+ | ** [http://www.genome.jp/dbget-bin/www_bget?R02621 R02621] | ||
+ | * UNIPROT: | ||
+ | ** [http://www.uniprot.org/uniprot/Q08642 Q08642] | ||
+ | ** [http://www.uniprot.org/uniprot/P20717 P20717] | ||
+ | ** [http://www.uniprot.org/uniprot/P70708 P70708] | ||
+ | {{#set: direction=left-to-right}} | ||
+ | {{#set: common-name=protein-arginine deiminase}} | ||
+ | {{#set: ec-number=ec-3.5.3.15}} | ||
{{#set: nb gene associated=1}} | {{#set: nb gene associated=1}} | ||
− | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=1}} |
− | {{#set: reconstruction category=orthology}} | + | {{#set: reconstruction category=annotation|orthology}} |
− | {{#set: reconstruction tool=pantograph}} | + | {{#set: reconstruction tool=pathwaytools|pantograph}} |
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
− | {{#set: reconstruction source= | + | {{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}} |
Revision as of 15:33, 5 January 2021
Contents
Reaction PROTEIN-ARGININE-DEIMINASE-RXN
- direction:
- left-to-right
- common-name:
- protein-arginine deiminase
- ec-number:
Reaction formula
- 1 Protein-L-Arginines[c] + 1 WATER[c] => 1 AMMONIUM[c] + 1 PROTEIN-L-CITRULLINE[c]
Gene(s) associated with this reaction
- Gene: SJ16434
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
Pathway(s)
- PWY-4921, protein citrullination:
- 1 reactions found over 1 reactions in the full pathway
Reconstruction information
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- category: orthology; source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
External links