Difference between revisions of "RXN-12519"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ADENPHOSPHOR-RXN ADENPHOSPHOR-RXN] == * direction: ** reversible * common-name: ** adenosine phosph...")
(Created page with "Category:reaction == Reaction 3.4.11.1-RXN == * direction: ** left-to-right * common-name: ** aminopeptidase * ec-number: ** [http://enzyme.expasy.org/EC/3.4.11.9 ec-3.4.1...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ADENPHOSPHOR-RXN ADENPHOSPHOR-RXN] ==
+
== Reaction 3.4.11.1-RXN ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
* common-name:
 
* common-name:
−
** adenosine phosphorylase
+
** aminopeptidase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.4.2.1 ec-2.4.2.1]
+
** [http://enzyme.expasy.org/EC/3.4.11.9 ec-3.4.11.9]
 +
** [http://enzyme.expasy.org/EC/3.4.11.1 ec-3.4.11.1]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ADENOSINE]][c] '''+''' 1 [[Pi]][c] '''<=>''' 1 [[ADENINE]][c] '''+''' 1 [[RIBOSE-1P]][c]
+
* 1 [[Protein-With-N-Terminal-X-Pro]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[Amino-Acids-20]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Protein-With-N-Terminal-Pro]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ03195]]
+
* Gene: [[SJ21022]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ00234]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ21020]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ21032]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-5532]], nucleoside and nucleotide degradation (archaea): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5532 PWY-5532]
 
−
** '''4''' reactions found over '''10''' reactions in the full pathway
 
−
* [[PWY0-1296]], purine ribonucleosides degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1296 PWY0-1296]
 
−
** '''6''' reactions found over '''6''' reactions in the full pathway
 
−
* [[P121-PWY]], adenine and adenosine salvage I: [http://metacyc.org/META/NEW-IMAGE?object=P121-PWY P121-PWY]
 
−
** '''2''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY-6609]], adenine and adenosine salvage III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6609 PWY-6609]
 
−
** '''4''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-6611]], adenine and adenosine salvage V: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6611 PWY-6611]
 
−
** '''2''' reactions found over '''3''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
* UNIPROT:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27645 27645]
+
** [http://www.uniprot.org/uniprot/P27888 P27888]
−
* LIGAND-RXN:
+
** [http://www.uniprot.org/uniprot/P00727 P00727]
−
** [http://www.genome.jp/dbget-bin/www_bget?R01561 R01561]
+
** [http://www.uniprot.org/uniprot/P68767 P68767]
−
{{#set: direction=reversible}}
+
** [http://www.uniprot.org/uniprot/P45334 P45334]
−
{{#set: common-name=adenosine phosphorylase}}
+
** [http://www.uniprot.org/uniprot/Q9JTI8 Q9JTI8]
−
{{#set: ec-number=ec-2.4.2.1}}
+
** [http://www.uniprot.org/uniprot/Q9PP04 Q9PP04]
−
{{#set: nb gene associated=1}}
+
** [http://www.uniprot.org/uniprot/P24828 P24828]
−
{{#set: nb pathway associated=5}}
+
** [http://www.uniprot.org/uniprot/P23341 P23341]
−
{{#set: reconstruction category=annotation}}
+
** [http://www.uniprot.org/uniprot/P28839 P28839]
−
{{#set: reconstruction tool=pathwaytools}}
+
** [http://www.uniprot.org/uniprot/P30184 P30184]
 +
** [http://www.uniprot.org/uniprot/P31427 P31427]
 +
** [http://www.uniprot.org/uniprot/Q42876 Q42876]
 +
** [http://www.uniprot.org/uniprot/Q48531 Q48531]
 +
** [http://www.uniprot.org/uniprot/O24022 O24022]
 +
** [http://www.uniprot.org/uniprot/Q10712 Q10712]
 +
** [http://www.uniprot.org/uniprot/Q43034 Q43034]
 +
{{#set: direction=left-to-right}}
 +
{{#set: common-name=aminopeptidase}}
 +
{{#set: ec-number=ec-3.4.11.9|ec-3.4.11.1}}
 +
{{#set: nb gene associated=4}}
 +
{{#set: nb pathway associated=0}}
 +
{{#set: reconstruction category=annotation|orthology}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}

Revision as of 20:38, 18 December 2020

Reaction 3.4.11.1-RXN

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links





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