Difference between revisions of "RXN-12559"

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(Created page with "Category:reaction == Reaction RXN-17920 == * direction: ** left-to-right == Reaction formula == * 1 DNA-Ligase-L-lysine[c] '''+''' 1 NAD[c] '''=>''' 1 DNA-Ligase...")
(Created page with "Category:reaction == Reaction RXN-12559 == * direction: ** left-to-right * common-name: ** trans-2-hexenoyl-coa reductase (nad+) * ec-number: ** [http://enzyme.expasy.org...")
 
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
== Reaction RXN-17920 ==
+
== Reaction RXN-12559 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 +
* common-name:
 +
** trans-2-hexenoyl-coa  reductase (nad+)
 +
* ec-number:
 +
** [http://enzyme.expasy.org/EC/1.3.1.44 ec-1.3.1.44]
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[DNA-Ligase-L-lysine]][c] '''+''' 1 [[NAD]][c] '''=>''' 1 [[DNA-Ligase-L-lysine-adenylate]][c] '''+''' 1 [[NICOTINAMIDE_NUCLEOTIDE]][c] '''+''' 2 [[PROTON]][c]
+
* 1 [[CPD0-2121]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[HEXANOYL-COA]][c] '''+''' 1 [[NAD]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ19344]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[SJ15543]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-6863]], pyruvate fermentation to hexanol (engineered):
 +
** '''9''' reactions found over '''11''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[gap-filling]]; source: [[gapfilling_solution_with_meneco_draft_medium]]; tool: [[meneco]]; comment: added for gapfilling
 
== External links  ==
 
== External links  ==
* METANETX-RXN : MNXR121264
+
* METANETX-RXN : MNXR117632
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: nb gene associated=2}}
+
{{#set: common-name=trans-2-hexenoyl-coa  reductase (nad+)}}
{{#set: nb pathway associated=0}}
+
{{#set: ec-number=ec-1.3.1.44}}
{{#set: reconstruction category=annotation}}
+
{{#set: nb gene associated=0}}
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: nb pathway associated=1}}
{{#set: reconstruction comment=n.a}}
+
{{#set: reconstruction category=gap-filling}}
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction tool=meneco}}
 +
{{#set: reconstruction comment=added for gapfilling}}
 +
{{#set: reconstruction source=gapfilling_solution_with_meneco_draft_medium}}

Latest revision as of 11:20, 18 March 2021

Reaction RXN-12559

  • direction:
    • left-to-right
  • common-name:
    • trans-2-hexenoyl-coa reductase (nad+)
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6863, pyruvate fermentation to hexanol (engineered):
    • 9 reactions found over 11 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR117632