Difference between revisions of "RXN-12567"

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(Created page with "Category:pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7657 PWY-7657] == * taxonomic-range: ** [http://metacyc.org/META/NEW-IMAGE?object=tax-2 tax-2] *...")
(Created page with "Category:reaction == Reaction 1.5.1.20-RXN == * direction: ** left-to-right * common-name: ** 5,10-methylenetetrahydrofolate reductase ** methylenetetrahydrofolate reducta...")
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[[Category:pathway]]
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[[Category:reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7657 PWY-7657] ==
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== Reaction 1.5.1.20-RXN ==
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* taxonomic-range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=tax-2 tax-2]
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** left-to-right
 
* common-name:
 
* common-name:
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** dtdp-β-l-digitoxose biosynthesis
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** 5,10-methylenetetrahydrofolate reductase
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== Reaction(s) found ==
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** methylenetetrahydrofolate reductase (nad(p)h)
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* [[DTDPGLUCDEHYDRAT-RXN]]
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* ec-number:
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== Reaction(s) not found ==
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** [http://enzyme.expasy.org/EC/1.5.1.20 ec-1.5.1.20]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-16262 RXN-16262]
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== Reaction formula ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12404 RXN-12404]
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* 1 [[METHYLENE-THF-GLU-N]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[5-METHYL-THF-GLU-N]][c] '''+''' 1 [[NAD]][c]
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* [http://metacyc.org/META/NEW-IMAGE?object=DTDPGLUCOSEPP-RXN DTDPGLUCOSEPP-RXN]
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== Gene(s) associated with this reaction  ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-16566 RXN-16566]
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* Gene: [[SJ09591]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-11993 RXN-11993]
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** Category: [[annotation]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12943 RXN-12943]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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{{#set: taxonomic-range=tax-2}}
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** Category: [[orthology]]
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{{#set: common-name=dtdp-β-l-digitoxose biosynthesis}}
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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{{#set: nb reaction found=1}}
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* Gene: [[SJ00407]]
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{{#set: completion rate=0.14}}
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** Category: [[annotation]]
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{{#set: nb total reaction=7}}
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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** Category: [[orthology]]
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* Gene: [[SJ19532]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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== Pathway(s) ==
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* [[1CMET2-PWY]], folate transformations III (E. coli):
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** '''8''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-3841]], folate transformations II (plants):
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** '''9''' reactions found over '''11''' reactions in the full pathway
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* [[PWY-2201]], folate transformations I:
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** '''9''' reactions found over '''10''' reactions in the full pathway
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* [[CODH-PWY]], reductive acetyl coenzyme A pathway I (homoacetogenic bacteria):
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** '''4''' reactions found over '''9''' reactions in the full pathway
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== Reconstruction information  ==
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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== External links  ==
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* LIGAND-RXN:
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** [http://www.genome.jp/dbget-bin/www_bget?R07168 R07168]
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* UNIPROT:
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** [http://www.uniprot.org/uniprot/Q9PN93 Q9PN93]
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** [http://www.uniprot.org/uniprot/Q9JUT7 Q9JUT7]
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** [http://www.uniprot.org/uniprot/P45208 P45208]
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** [http://www.uniprot.org/uniprot/P0AEZ1 P0AEZ1]
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** [http://www.uniprot.org/uniprot/P11003 P11003]
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** [http://www.uniprot.org/uniprot/P46151 P46151]
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** [http://www.uniprot.org/uniprot/P53128 P53128]
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{{#set: direction=left-to-right}}
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{{#set: common-name=methylenetetrahydrofolate reductase (nad(p)h)|5,10-methylenetetrahydrofolate reductase}}
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{{#set: ec-number=ec-1.5.1.20}}
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{{#set: nb gene associated=3}}
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{{#set: nb pathway associated=4}}
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{{#set: reconstruction category=annotation|orthology}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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{{#set: reconstruction comment=n.a}}
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{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}

Revision as of 20:45, 18 December 2020

Reaction 1.5.1.20-RXN

  • direction:
    • left-to-right
  • common-name:
    • 5,10-methylenetetrahydrofolate reductase
    • methylenetetrahydrofolate reductase (nad(p)h)
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • 1CMET2-PWY, folate transformations III (E. coli):
    • 8 reactions found over 9 reactions in the full pathway
  • PWY-3841, folate transformations II (plants):
    • 9 reactions found over 11 reactions in the full pathway
  • PWY-2201, folate transformations I:
    • 9 reactions found over 10 reactions in the full pathway
  • CODH-PWY, reductive acetyl coenzyme A pathway I (homoacetogenic bacteria):
    • 4 reactions found over 9 reactions in the full pathway

Reconstruction information

External links





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