Difference between revisions of "RXN-12570"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14778 RXN-14778] == * direction: ** left-to-right * common-name: ** trans--2-enoyl-coa hydratas...")
(Created page with "Category:reaction == Reaction ACETYL-COA-ACETYLTRANSFER-RXN == * direction: ** reversible * common-name: ** acetyl-coa acetyltransferase * ec-number: ** [http://enzyme.exp...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14778 RXN-14778] ==
+
== Reaction ACETYL-COA-ACETYLTRANSFER-RXN ==
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
 
* common-name:
 
* common-name:
−
** trans--2-enoyl-coa hydratase 2
+
** acetyl-coa acetyltransferase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/4.2.1.119 ec-4.2.1.119]
+
** [http://enzyme.expasy.org/EC/2.3.1.9 ec-2.3.1.9]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CPD-15656]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CPD-15657]][c]
+
* 2 [[ACETYL-COA]][c] '''<=>''' 1 [[ACETOACETYL-COA]][c] '''+''' 1 [[CO-A]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ03584]]
+
* Gene: [[SJ09371]]
−
** Category: [[annotation]]
+
** Category: [[orthology]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ04769]]
+
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ14898]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ21818]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-7337]], 10-cis-heptadecenoyl-CoA degradation (yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7337 PWY-7337]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
** '''6''' reactions found over '''12''' reactions in the full pathway
+
* [[PWY-6174]], mevalonate pathway II (archaea):
−
* [[PWY-7338]], 10-trans-heptadecenoyl-CoA degradation (reductase-dependent, yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7338 PWY-7338]
+
** '''6''' reactions found over '''7''' reactions in the full pathway
−
** '''6''' reactions found over '''12''' reactions in the full pathway
+
* [[PWY-6883]], pyruvate fermentation to butanol II (engineered):
 +
** '''5''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-6876]], isopropanol biosynthesis (engineered):
 +
** '''2''' reactions found over '''5''' reactions in the full pathway
 +
* [[ACETOACETATE-DEG-PWY]], acetoacetate degradation (to acetyl CoA):
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-5177]], glutaryl-CoA degradation:
 +
** '''5''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-6588]], pyruvate fermentation to acetone:
 +
** '''2''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-922]], mevalonate pathway I:
 +
** '''7''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-6583]], pyruvate fermentation to butanol I:
 +
** '''6''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-5789]], 3-hydroxypropanoate/4-hydroxybutanate cycle:
 +
** '''8''' reactions found over '''18''' reactions in the full pathway
 +
* [[PWY1-3]], polyhydroxybutanoate biosynthesis:
 +
** '''2''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-7216]], (R)- and (S)-3-hydroxybutanoate biosynthesis (engineered):
 +
** '''3''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-7401]], crotonate fermentation (to acetate and cyclohexane carboxylate):
 +
** '''6''' reactions found over '''15''' reactions in the full pathway
 +
* [[PWY-7391]], isoprene biosynthesis II (engineered):
 +
** '''7''' reactions found over '''8''' reactions in the full pathway
 +
* [[P162-PWY]], L-glutamate degradation V (via hydroxyglutarate):
 +
** '''7''' reactions found over '''11''' reactions in the full pathway
 +
* [[PWY-5741]], ethylmalonyl-CoA pathway:
 +
** '''2''' reactions found over '''11''' reactions in the full pathway
 +
* [[PWY-6863]], pyruvate fermentation to hexanol (engineered):
 +
** '''9''' reactions found over '''11''' reactions in the full pathway
 +
* [[P163-PWY]], L-lysine fermentation to acetate and butanoate:
 +
** '''3''' reactions found over '''10''' reactions in the full pathway
 +
* [[PWY-7779]], methyl tert-butyl ether degradation:
 +
** '''2''' reactions found over '''10''' reactions in the full pathway
 +
* [[PWY-7778]], 2-methylpropene degradation:
 +
** '''3''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-7524]], mevalonate pathway III (archaea):
 +
** '''5''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY66-368]], ketolysis:
 +
** '''2''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY66-367]], ketogenesis:
 +
** '''4''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-5676]], acetyl-CoA fermentation to butanoate II:
 +
** '''4''' reactions found over '''5''' reactions in the full pathway
 +
* [[CENTFERM-PWY]], pyruvate fermentation to butanoate:
 +
** '''5''' reactions found over '''7''' reactions in the full pathway
 +
</div>
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
{{#set: direction=left-to-right}}
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
{{#set: common-name=trans--2-enoyl-coa hydratase 2}}
+
* RHEA:
−
{{#set: ec-number=ec-4.2.1.119}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21039 21039]
−
{{#set: nb gene associated=2}}
+
* LIGAND-RXN:
−
{{#set: nb pathway associated=2}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R00238 R00238]
−
{{#set: reconstruction category=annotation}}
+
* UNIPROT:
−
{{#set: reconstruction tool=pathwaytools}}
+
** [http://www.uniprot.org/uniprot/Q8CAY6 Q8CAY6]
 +
** [http://www.uniprot.org/uniprot/P41338 P41338]
 +
** [http://www.uniprot.org/uniprot/P45362 P45362]
 +
** [http://www.uniprot.org/uniprot/Q9BWD1 Q9BWD1]
 +
** [http://www.uniprot.org/uniprot/P45359 P45359]
 +
** [http://www.uniprot.org/uniprot/P24752 P24752]
 +
** [http://www.uniprot.org/uniprot/Q12598 Q12598]
 +
** [http://www.uniprot.org/uniprot/P45369 P45369]
 +
** [http://www.uniprot.org/uniprot/P46707 P46707]
 +
** [http://www.uniprot.org/uniprot/P73825 P73825]
 +
** [http://www.uniprot.org/uniprot/Q43637 Q43637]
 +
** [http://www.uniprot.org/uniprot/Q9UQW6 Q9UQW6]
 +
** [http://www.uniprot.org/uniprot/Q9Z3Y4 Q9Z3Y4]
 +
** [http://www.uniprot.org/uniprot/P77852 P77852]
 +
** [http://www.uniprot.org/uniprot/Q9XD81 Q9XD81]
 +
** [http://www.uniprot.org/uniprot/Q9ZGI9 Q9ZGI9]
 +
** [http://www.uniprot.org/uniprot/Q9L8E0 Q9L8E0]
 +
** [http://www.uniprot.org/uniprot/P14611 P14611]
 +
** [http://www.uniprot.org/uniprot/P07097 P07097]
 +
** [http://www.uniprot.org/uniprot/P17764 P17764]
 +
</div>
 +
{{#set: direction=reversible}}
 +
{{#set: common-name=acetyl-coa acetyltransferase}}
 +
{{#set: ec-number=ec-2.3.1.9}}
 +
{{#set: nb gene associated=3}}
 +
{{#set: nb pathway associated=24}}
 +
{{#set: reconstruction category=annotation|orthology}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus|output_pantograph_nannochloropsis_salina|output_pantograph_arabidopsis_thaliana}}

Revision as of 20:39, 18 December 2020

Reaction ACETYL-COA-ACETYLTRANSFER-RXN

  • direction:
    • reversible
  • common-name:
    • acetyl-coa acetyltransferase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6174, mevalonate pathway II (archaea):
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-6883, pyruvate fermentation to butanol II (engineered):
    • 5 reactions found over 6 reactions in the full pathway
  • PWY-6876, isopropanol biosynthesis (engineered):
    • 2 reactions found over 5 reactions in the full pathway
  • ACETOACETATE-DEG-PWY, acetoacetate degradation (to acetyl CoA):
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-5177, glutaryl-CoA degradation:
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-6588, pyruvate fermentation to acetone:
    • 2 reactions found over 5 reactions in the full pathway
  • PWY-922, mevalonate pathway I:
    • 7 reactions found over 7 reactions in the full pathway
  • PWY-6583, pyruvate fermentation to butanol I:
    • 6 reactions found over 8 reactions in the full pathway
  • PWY-5789, 3-hydroxypropanoate/4-hydroxybutanate cycle:
    • 8 reactions found over 18 reactions in the full pathway
  • PWY1-3, polyhydroxybutanoate biosynthesis:
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-7216, (R)- and (S)-3-hydroxybutanoate biosynthesis (engineered):
    • 3 reactions found over 5 reactions in the full pathway
  • PWY-7401, crotonate fermentation (to acetate and cyclohexane carboxylate):
    • 6 reactions found over 15 reactions in the full pathway
  • PWY-7391, isoprene biosynthesis II (engineered):
    • 7 reactions found over 8 reactions in the full pathway
  • P162-PWY, L-glutamate degradation V (via hydroxyglutarate):
    • 7 reactions found over 11 reactions in the full pathway
  • PWY-5741, ethylmalonyl-CoA pathway:
    • 2 reactions found over 11 reactions in the full pathway
  • PWY-6863, pyruvate fermentation to hexanol (engineered):
    • 9 reactions found over 11 reactions in the full pathway
  • P163-PWY, L-lysine fermentation to acetate and butanoate:
    • 3 reactions found over 10 reactions in the full pathway
  • PWY-7779, methyl tert-butyl ether degradation:
    • 2 reactions found over 10 reactions in the full pathway
  • PWY-7778, 2-methylpropene degradation:
    • 3 reactions found over 8 reactions in the full pathway
  • PWY-7524, mevalonate pathway III (archaea):
    • 5 reactions found over 8 reactions in the full pathway
  • PWY66-368, ketolysis:
    • 2 reactions found over 3 reactions in the full pathway
  • PWY66-367, ketogenesis:
    • 4 reactions found over 5 reactions in the full pathway
  • PWY-5676, acetyl-CoA fermentation to butanoate II:
    • 4 reactions found over 5 reactions in the full pathway
  • CENTFERM-PWY, pyruvate fermentation to butanoate:
    • 5 reactions found over 7 reactions in the full pathway

Reconstruction information

External links





Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=RXN-12570&oldid=49255"