Difference between revisions of "RXN-12581"

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(Created page with "Category:pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6946 PWY-6946] == * taxonomic-range: ** [http://metacyc.org/META/NEW-IMAGE?object=tax-2 tax-2] *...")
 
(Created page with "Category:reaction == Reaction RXN-12581 == * direction: ** left-to-right * common-name: ** all-trans-retinol dehydrogenase ** retinol dehydrogenase * ec-number: ** [http:/...")
 
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[[Category:pathway]]
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[[Category:reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6946 PWY-6946] ==
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== Reaction RXN-12581 ==
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* taxonomic-range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=tax-2 tax-2]
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** left-to-right
 
* common-name:
 
* common-name:
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** cholesterol degradation to androstenedione ii (cholesterol dehydrogenase)
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** all-trans-retinol dehydrogenase
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== Reaction(s) found ==
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** retinol dehydrogenase
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* [[RXN-12693]]
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* ec-number:
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* [[RXN-12705]]
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** [http://enzyme.expasy.org/EC/1.1.1.105 ec-1.1.1.105]
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* [[RXN-12710]]
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== Reaction formula ==
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* [[RXN-12848]]
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* 1 [[CRPB-all-trans-Retinol]][c] '''+''' 1 [[NAD]][c] '''=>''' 1 [[CRPB-all-trans-Retinal]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c]
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* [[RXN-12849]]
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== Gene(s) associated with this reaction  ==
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* [[RXN-12850]]
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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== Reaction(s) not found ==
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* Gene: [[SJ21322]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12694 RXN-12694]
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** Category: [[annotation]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-17647 RXN-17647]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12743 RXN-12743]
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* Gene: [[SJ20291]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12744 RXN-12744]
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** Category: [[annotation]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12745 RXN-12745]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-17648 RXN-17648]
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* Gene: [[SJ21312]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12706 RXN-12706]
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** Category: [[annotation]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12709 RXN-12709]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12708 RXN-12708]
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* Gene: [[SJ10028]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12703 RXN-12703]
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** Category: [[annotation]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-17646 RXN-17646]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-17645 RXN-17645]
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* Gene: [[SJ12574]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-17650 RXN-17650]
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** Category: [[annotation]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12704 RXN-12704]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12707 RXN-12707]
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* Gene: [[SJ05274]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12702 RXN-12702]
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** Category: [[annotation]]
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{{#set: taxonomic-range=tax-2}}
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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{{#set: common-name=cholesterol degradation to androstenedione ii (cholesterol dehydrogenase)}}
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* Gene: [[SJ05275]]
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{{#set: nb reaction found=6}}
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** Category: [[annotation]]
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{{#set: completion rate=0.27}}
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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{{#set: nb total reaction=22}}
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* Gene: [[SJ05277]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* Gene: [[SJ02723]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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* Gene: [[SJ19151]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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* Gene: [[SJ05276]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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</div>
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== Pathway(s)  ==
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* [[PWY-6872]], retinoate biosynthesis I:
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** '''1''' reactions found over '''4''' reactions in the full pathway
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== Reconstruction information  ==
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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== External links  ==
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* METANETX-RXN : MNXR117642
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* RHEA:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=48489 48489]
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{{#set: direction=left-to-right}}
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{{#set: common-name=retinol dehydrogenase|all-trans-retinol dehydrogenase}}
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{{#set: ec-number=ec-1.1.1.105}}
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{{#set: nb gene associated=11}}
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{{#set: nb pathway associated=1}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction comment=n.a}}
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{{#set: reconstruction source=saccharina_japonica_genome}}

Latest revision as of 11:23, 18 March 2021

Reaction RXN-12581

  • direction:
    • left-to-right
  • common-name:
    • all-trans-retinol dehydrogenase
    • retinol dehydrogenase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6872, retinoate biosynthesis I:
    • 1 reactions found over 4 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR117642
  • RHEA:





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