Difference between revisions of "RXN-12610"

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(Created page with "Category:reaction == Reaction RXN-7645 == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/2.3.1 ec-2.3.1] == Reaction formula == * 1 CINNAMOYL...")
(Created page with "Category:reaction == Reaction RXN-12610 == * direction: ** left-to-right * common-name: ** thiamine phosphate synthase * ec-number: ** [http://enzyme.expasy.org/EC/2.5.1.3...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-7645 ==
+
== Reaction RXN-12610 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 +
* common-name:
 +
** thiamine phosphate synthase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.3.1 ec-2.3.1]
+
** [http://enzyme.expasy.org/EC/2.5.1.3 ec-2.5.1.3]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CINNAMOYL-COA]][c] '''+''' 3 [[MALONYL-COA]][c] '''+''' 3 [[PROTON]][c] '''=>''' 3 [[CARBON-DIOXIDE]][c] '''+''' 4 [[CO-A]][c] '''+''' 1 [[CPD-6993]][c]
+
* 1 [[AMINO-HYDROXYMETHYL-METHYLPYRIMIDINE-PP]][c] '''+''' 1 [[CPD-13576]][c] '''+''' 2 [[PROTON]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[THIAMINE-P]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ18059]]
+
* Gene: [[SJ18183]]
−
** Category: [[orthology]]
+
** Category: [[annotation]]
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
* Gene: [[SJ20500]]
−
* Gene: [[SJ20077]]
+
** Category: [[annotation]]
−
** Category: [[orthology]]
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-5059]], pinobanksin biosynthesis:
+
* [[PWY-6907]], thiamine diphosphate biosynthesis III (Staphylococcus):
−
** '''3''' reactions found over '''5''' reactions in the full pathway
+
** '''2''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-6893]], thiamine diphosphate biosynthesis II (Bacillus):
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
+
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R07987 R07987]
+
** [http://www.genome.jp/dbget-bin/www_bget?R10712 R10712]
 +
* METANETX-RXN : MNXR114031
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=47849 47849]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: ec-number=ec-2.3.1}}
+
{{#set: common-name=thiamine phosphate synthase}}
 +
{{#set: ec-number=ec-2.5.1.3}}
 
{{#set: nb gene associated=2}}
 
{{#set: nb gene associated=2}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=2}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|output_pantograph_arabidopsis_thaliana}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Latest revision as of 11:19, 18 March 2021

Reaction RXN-12610

  • direction:
    • left-to-right
  • common-name:
    • thiamine phosphate synthase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6907, thiamine diphosphate biosynthesis III (Staphylococcus):
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-6893, thiamine diphosphate biosynthesis II (Bacillus):
    • 1 reactions found over 2 reactions in the full pathway

Reconstruction information

External links

  • LIGAND-RXN:
  • METANETX-RXN : MNXR114031
  • RHEA:





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