Difference between revisions of "RXN-12610"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-5470 RXN-5470] == * direction: ** left-to-right * common-name: ** (mannosyl)9-(n-acetylglucosam...")
 
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11840 RXN-11840] == * direction: ** left-to-right * common-name: ** trna pseudouridine65 syntha...")
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-5470 RXN-5470] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11840 RXN-11840] ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
** (mannosyl)9-(n-acetylglucosaminyl)2-diphosphodolichol glucosyltransferase
+
** trna pseudouridine65 synthase
** dolichyl pyrophosphate man9glcnac2 alpha-1,3-glucosyltransferase
 
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/2.4.1.267 ec-2.4.1.267]
+
** [http://enzyme.expasy.org/EC/5.4.99.26 ec-5.4.99.26]
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[CPD-166]][c] '''+''' 1 [[CPD-5168]][c] '''=>''' 1 [[CPD-5169]][c] '''+''' 1 [[DOLICHOLP]][c] '''+''' 1 [[PROTON]][c]
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* 1 [[tRNA-uridine65]][c] '''=>''' 1 [[tRNA-pseudouridine65]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ10727]]
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* Gene: [[SJ04484]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
* Gene: [[SJ18634]]
+
* Gene: [[SJ04338]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS]], protein N-glycosylation initial phase (eukaryotic): [http://metacyc.org/META/NEW-IMAGE?object=MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS]
 
** '''16''' reactions found over '''19''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
* LIGAND-RXN:
 
** [http://www.genome.jp/dbget-bin/www_bget?R06262 R06262]
 
* RHEA:
 
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30638 30638]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: common-name=(mannosyl)9-(n-acetylglucosaminyl)2-diphosphodolichol glucosyltransferase|dolichyl pyrophosphate man9glcnac2 alpha-1,3-glucosyltransferase}}
+
{{#set: common-name=trna pseudouridine65 synthase}}
{{#set: ec-number=ec-2.4.1.267}}
+
{{#set: ec-number=ec-5.4.99.26}}
 
{{#set: nb gene associated=2}}
 
{{#set: nb gene associated=2}}
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=0}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 14:26, 26 August 2019

Reaction RXN-11840

  • direction:
    • left-to-right
  • common-name:
    • trna pseudouridine65 synthase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links