Difference between revisions of "RXN-12611"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17799 RXN-17799] == * direction: ** left-to-right * common-name: ** 3-ketoacyl-coa thiolase **...")
(Created page with "Category:reaction == Reaction IPMS == * direction: ** left-to-right * common-name: ** 2-isopropylmalate synthase == Reaction formula == * 1.0 2-KETO-ISOVALERATE[c] '''...")
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17799 RXN-17799] ==
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== Reaction IPMS ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
** 3-ketoacyl-coa thiolase
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** 2-isopropylmalate synthase
** acetyl-coa c-acyltransferase
 
* ec-number:
 
** [http://enzyme.expasy.org/EC/2.3.1.16 ec-2.3.1.16]
 
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[CO-A]][c] '''+''' 1 [[CPD-19153]][c] '''=>''' 1 [[ACETYL-COA]][c] '''+''' 1 [[CPD-14925]][c]
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* 1.0 [[2-KETO-ISOVALERATE]][c] '''+''' 1.0 [[ACETYL-COA]][c] '''+''' 1.0 [[WATER]][c] '''=>''' 1.0 [[3-CARBOXY-3-HYDROXY-ISOCAPROATE]][c] '''+''' 1.0 [[CO-A]][c] '''+''' 1.0 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ16470]]
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* Gene: [[SJ04717]]
** Category: [[annotation]]
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** Category: [[orthology]]
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
* Gene: [[SJ21818]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[SJ14898]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
* Gene: [[SJ21817]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[SJ09371]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: common-name=acetyl-coa c-acyltransferase|3-ketoacyl-coa thiolase}}
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{{#set: common-name=2-isopropylmalate synthase}}
{{#set: ec-number=ec-2.3.1.16}}
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{{#set: nb gene associated=1}}
{{#set: nb gene associated=5}}
 
 
{{#set: nb pathway associated=0}}
 
{{#set: nb pathway associated=0}}
{{#set: reconstruction category=annotation}}
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{{#set: reconstruction category=orthology}}
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina}}

Revision as of 20:42, 18 December 2020

Reaction IPMS

  • direction:
    • left-to-right
  • common-name:
    • 2-isopropylmalate synthase

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links