Difference between revisions of "RXN-12613"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLUCOKIN-RXN GLUCOKIN-RXN] == * direction: ** left-to-right * common-name: ** hexokinase ** glucoki...")
 
(Created page with "Category:pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-2582 PWY-2582] == * taxonomic-range: ** [http://metacyc.org/META/NEW-IMAGE?object=tax-3193 tax-31...")
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[[Category:reaction]]
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[[Category:pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLUCOKIN-RXN GLUCOKIN-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-2582 PWY-2582] ==
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* direction:
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* taxonomic-range:
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** left-to-right
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** [http://metacyc.org/META/NEW-IMAGE?object=tax-3193 tax-3193]
 
* common-name:
 
* common-name:
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** hexokinase
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** brassinosteroid biosynthesis ii
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** glucokinase
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== Reaction(s) found ==
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* ec-number:
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* [[RXN-4225]]
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** [http://enzyme.expasy.org/EC/2.7.1.1 ec-2.7.1.1]
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* [[RXN-4231]]
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** [http://enzyme.expasy.org/EC/2.7.1.2 ec-2.7.1.2]
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* [[RXN-711]]
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== Reaction formula ==
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* [[RXN-773]]
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* 1 [[ATP]][c] '''+''' 1 [[Glucopyranose]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[D-glucopyranose-6-phosphate]][c] '''+''' 1 [[PROTON]][c]
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== Reaction(s) not found ==
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== Gene(s) associated with this reaction  ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-710 RXN-710]
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* Gene: [[SJ04919]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-776 RXN-776]
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** Category: [[annotation]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-11529 RXN-11529]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-4229 RXN-4229]
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** Category: [[orthology]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-11533 RXN-11533]
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-774 RXN-774]
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* Gene: [[SJ12224]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-11534 RXN-11534]
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** Category: [[annotation]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-11532 RXN-11532]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-4226 RXN-4226]
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* Gene: [[SJ19906]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-712 RXN-712]
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** Category: [[annotation]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-709 RXN-709]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-11531 RXN-11531]
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== Pathway(s) ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-11101 RXN-11101]
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-11530 RXN-11530]
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* [[PWY-2723]], trehalose degradation V: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2723 PWY-2723]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-4230 RXN-4230]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-4228 RXN-4228]
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* [[PWY0-1182]], trehalose degradation II (cytosolic): [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1182 PWY0-1182]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-775 RXN-775]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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{{#set: taxonomic-range=tax-3193}}
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* [[P122-PWY]], heterolactic fermentation: [http://metacyc.org/META/NEW-IMAGE?object=P122-PWY P122-PWY]
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{{#set: common-name=brassinosteroid biosynthesis ii}}
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** '''16''' reactions found over '''18''' reactions in the full pathway
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{{#set: nb reaction found=4}}
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* [[PWY-5661]], GDP-glucose biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5661 PWY-5661]
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{{#set: completion rate=0.19}}
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** '''2''' reactions found over '''3''' reactions in the full pathway
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{{#set: nb total reaction=21}}
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* [[GLYCOCAT-PWY]], glycogen degradation I: [http://metacyc.org/META/NEW-IMAGE?object=GLYCOCAT-PWY GLYCOCAT-PWY]
 
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** '''6''' reactions found over '''8''' reactions in the full pathway
 
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* [[PWY-7238]], sucrose biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7238 PWY-7238]
 
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** '''5''' reactions found over '''8''' reactions in the full pathway
 
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* [[P124-PWY]], Bifidobacterium shunt: [http://metacyc.org/META/NEW-IMAGE?object=P124-PWY P124-PWY]
 
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** '''12''' reactions found over '''15''' reactions in the full pathway
 
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* [[GLUCOSE1PMETAB-PWY]], glucose and glucose-1-phosphate degradation: [http://metacyc.org/META/NEW-IMAGE?object=GLUCOSE1PMETAB-PWY GLUCOSE1PMETAB-PWY]
 
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** '''3''' reactions found over '''5''' reactions in the full pathway
 
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* [[PWY-7385]], 1,3-propanediol biosynthesis (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7385 PWY-7385]
 
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** '''7''' reactions found over '''9''' reactions in the full pathway
 
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* [[PWY-2722]], trehalose degradation IV: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2722 PWY-2722]
 
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** '''1''' reactions found over '''3''' reactions in the full pathway
 
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* [[TREDEGLOW-PWY]], trehalose degradation I (low osmolarity): [http://metacyc.org/META/NEW-IMAGE?object=TREDEGLOW-PWY TREDEGLOW-PWY]
 
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** '''1''' reactions found over '''2''' reactions in the full pathway
 
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* [[PWY-621]], sucrose degradation III (sucrose invertase): [http://metacyc.org/META/NEW-IMAGE?object=PWY-621 PWY-621]
 
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** '''3''' reactions found over '''4''' reactions in the full pathway
 
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* [[ANAGLYCOLYSIS-PWY]], glycolysis III (from glucose): [http://metacyc.org/META/NEW-IMAGE?object=ANAGLYCOLYSIS-PWY ANAGLYCOLYSIS-PWY]
 
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** '''10''' reactions found over '''11''' reactions in the full pathway
 
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* [[PWY-5514]], UDP-N-acetyl-D-galactosamine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5514 PWY-5514]
 
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** '''5''' reactions found over '''7''' reactions in the full pathway
 
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</div>
 
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== Reconstruction information  ==
 
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
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== External links  ==
 
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* LIGAND-RXN:
 
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** [http://www.genome.jp/dbget-bin/www_bget?R01786 R01786]
 
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** [http://www.genome.jp/dbget-bin/www_bget?R00299 R00299]
 
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* RHEA:
 
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17825 17825]
 
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* UNIPROT:
 
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** [http://www.uniprot.org/uniprot/P0A6V8 P0A6V8]
 
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** [http://www.uniprot.org/uniprot/P21908 P21908]
 
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** [http://www.uniprot.org/uniprot/P64254 P64254]
 
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** [http://www.uniprot.org/uniprot/Q8XDH5 Q8XDH5]
 
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** [http://www.uniprot.org/uniprot/Q8XDH4 Q8XDH4]
 
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** [http://www.uniprot.org/uniprot/Q9CE25 Q9CE25]
 
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** [http://www.uniprot.org/uniprot/P52792 P52792]
 
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** [http://www.uniprot.org/uniprot/Q9V2Z6 Q9V2Z6]
 
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** [http://www.uniprot.org/uniprot/Q7M537 Q7M537]
 
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** [http://www.uniprot.org/uniprot/P17709 P17709]
 
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** [http://www.uniprot.org/uniprot/Q04409 Q04409]
 
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** [http://www.uniprot.org/uniprot/Q92407 Q92407]
 
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** [http://www.uniprot.org/uniprot/O31392 O31392]
 
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{{#set: direction=left-to-right}}
 
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{{#set: common-name=glucokinase|hexokinase}}
 
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{{#set: ec-number=ec-2.7.1.1|ec-2.7.1.2}}
 
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{{#set: nb gene associated=3}}
 
−
{{#set: nb pathway associated=14}}
 
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{{#set: reconstruction category=orthology|annotation}}
 
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{{#set: reconstruction tool=pathwaytools|pantograph}}
 
−
{{#set: reconstruction comment=n.a}}
 
−
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}
 

Revision as of 14:28, 26 August 2019

Pathway PWY-2582

  • taxonomic-range:
  • common-name:
    • brassinosteroid biosynthesis ii

Reaction(s) found

Reaction(s) not found



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