Difference between revisions of "RXN-12615"

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(Created page with "Category:reaction == Reaction PYRUVATE-CARBOXYLASE-RXN == * direction: ** left-to-right * common-name: ** pyruvate carboxylase * ec-number: ** [http://enzyme.expasy.org/EC...")
(Created page with "Category:reaction == Reaction RXN-12615 == * direction: ** left-to-right * common-name: ** xanthine oxidase (superoxide-forming) * ec-number: ** [http://enzyme.expasy.org/...")
 
(2 intermediate revisions by 2 users not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction PYRUVATE-CARBOXYLASE-RXN ==
+
== Reaction RXN-12615 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** pyruvate carboxylase
+
** xanthine oxidase (superoxide-forming)
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/6.4.1.1 ec-6.4.1.1]
+
** [http://enzyme.expasy.org/EC/1.17.3.2 ec-1.17.3.2]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ATP]][c] '''+''' 1 [[HCO3]][c] '''+''' 1 [[PYRUVATE]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[OXALACETIC_ACID]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Pi]][c]
+
* 2 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[RH-Group]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[Alcohols]][c] '''+''' 2 [[PROTON]][c] '''+''' 2 [[SUPER-OXIDE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ12670]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* Gene: [[SJ13095]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
** Category: [[orthology]]
+
* Gene: [[SJ13101]]
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ00485]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ05668]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ05674]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ13100]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ13098]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ05660]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ05673]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
</div>
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-5750]], itaconate biosynthesis I:
 
−
** '''3''' reactions found over '''2''' reactions in the full pathway
 
−
* [[P42-PWY]], incomplete reductive TCA cycle:
 
−
** '''5''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY66-399]], gluconeogenesis III:
 
−
** '''11''' reactions found over '''12''' reactions in the full pathway
 
−
* [[PWY-6146]], Methanobacterium thermoautotrophicum biosynthetic metabolism:
 
−
** '''9''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY-6142]], gluconeogenesis II (Methanobacterium thermoautotrophicum):
 
−
** '''10''' reactions found over '''13''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
* METANETX-RXN : MNXR117661
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20845 20845]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R00344 R00344]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/Q05920 Q05920]
 
−
** [http://www.uniprot.org/uniprot/Q9PNQ4 Q9PNQ4]
 
−
** [http://www.uniprot.org/uniprot/P95127 P95127]
 
−
** [http://www.uniprot.org/uniprot/Q9PP00 Q9PP00]
 
−
** [http://www.uniprot.org/uniprot/Q9CHQ7 Q9CHQ7]
 
−
** [http://www.uniprot.org/uniprot/Q9KWU4 Q9KWU4]
 
−
** [http://www.uniprot.org/uniprot/P11498 P11498]
 
−
** [http://www.uniprot.org/uniprot/P52873 P52873]
 
−
** [http://www.uniprot.org/uniprot/P11154 P11154]
 
−
** [http://www.uniprot.org/uniprot/P32327 P32327]
 
−
** [http://www.uniprot.org/uniprot/O17732 O17732]
 
−
** [http://www.uniprot.org/uniprot/Q9UUE1 Q9UUE1]
 
−
** [http://www.uniprot.org/uniprot/Q16921 Q16921]
 
−
** [http://www.uniprot.org/uniprot/Q9XBJ1 Q9XBJ1]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=pyruvate carboxylase}}
+
{{#set: common-name=xanthine oxidase (superoxide-forming)}}
−
{{#set: ec-number=ec-6.4.1.1}}
+
{{#set: ec-number=ec-1.17.3.2}}
−
{{#set: nb gene associated=2}}
+
{{#set: nb gene associated=8}}
−
{{#set: nb pathway associated=5}}
+
{{#set: nb pathway associated=0}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Latest revision as of 11:22, 18 March 2021

Reaction RXN-12615

  • direction:
    • left-to-right
  • common-name:
    • xanthine oxidase (superoxide-forming)
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

  • METANETX-RXN : MNXR117661





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