Difference between revisions of "RXN-12618"

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(Created page with "Category:reaction == Reaction SELENOCYSTEINE-LYASE-RXN == * direction: ** left-to-right * common-name: ** selenocysteine lyase * ec-number: ** [http://enzyme.expasy.org/EC...")
(Created page with "Category:reaction == Reaction FTHFL == * direction: ** left-to-right * common-name: ** formate--tetrahydrofolate ligase == Reaction formula == * 1.0 ATP[c] '''+''' 1.0...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
== Reaction SELENOCYSTEINE-LYASE-RXN ==
+
== Reaction FTHFL ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
** selenocysteine lyase
+
** formate--tetrahydrofolate ligase
* ec-number:
 
** [http://enzyme.expasy.org/EC/4.4.1.16 ec-4.4.1.16]
 
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[Donor-H2]][c] '''+''' 1 [[L-SELENOCYSTEINE]][c] '''=>''' 1 [[Acceptor]][c] '''+''' 1 [[L-ALPHA-ALANINE]][c] '''+''' 2 [[PROTON]][c] '''+''' 1 [[SE-2]][c]
+
* 1.0 [[ATP]][c] '''+''' 1.0 [[FORMATE]][c] '''+''' 1.0 [[THF]][c] '''=>''' 1.0 [[10-FORMYL-THF]][c] '''+''' 1.0 [[ADP]][c] '''+''' 1.0 [[Pi]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ17324]]
+
* Gene: [[SJ07523]]
** Category: [[annotation]]
+
** Category: [[orthology]]
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
* Gene: [[SJ13485]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[SJ19133]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[SJ03223]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
* LIGAND-RXN:
 
** [http://www.genome.jp/dbget-bin/www_bget?R03599 R03599]
 
* RHEA:
 
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11632 11632]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: common-name=selenocysteine lyase}}
+
{{#set: common-name=formate--tetrahydrofolate ligase}}
{{#set: ec-number=ec-4.4.1.16}}
+
{{#set: nb gene associated=1}}
{{#set: nb gene associated=4}}
 
 
{{#set: nb pathway associated=0}}
 
{{#set: nb pathway associated=0}}
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=orthology}}
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina}}

Revision as of 15:02, 5 January 2021

Reaction FTHFL

  • direction:
    • left-to-right
  • common-name:
    • formate--tetrahydrofolate ligase

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links