Difference between revisions of "RXN-12623"

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(Created page with "Category:reaction == Reaction 3-DEHYDROSPHINGANINE-REDUCTASE-RXN == * direction: ** left-to-right * common-name: ** 3-ketodihydrosphingosine reductase * ec-number: ** [htt...")
(Created page with "Category:reaction == Reaction RXN-12623 == * direction: ** left-to-right * common-name: ** n,n'-diacetylchitobiose synthase * ec-number: ** [http://enzyme.expasy.org/EC/3....")
 
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction 3-DEHYDROSPHINGANINE-REDUCTASE-RXN ==
+
== Reaction RXN-12623 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** 3-ketodihydrosphingosine reductase
+
** n,n'-diacetylchitobiose synthase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.1.1.102 ec-1.1.1.102]
+
** [http://enzyme.expasy.org/EC/3.2.1.202 ec-3.2.1.202]
 +
* synonymous:
 +
** endolytic chitodextrinase
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[DEHYDROSPHINGANINE]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CPD-13612]][c] '''+''' 1 [[NADP]][c]
+
* 1 [[Chitodextrins]][c] '''+''' n [[WATER]][c] '''=>''' n [[CHITOBIOSE]][c] '''+''' 1 [[CPD-13227]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ12778]]
+
* Gene: [[SJ19451]]
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[SPHINGOLIPID-SYN-PWY]], sphingolipid biosynthesis (yeast):
+
* [[PWY-6902]], chitin degradation II (Vibrio):
−
** '''4''' reactions found over '''11''' reactions in the full pathway
+
** '''3''' reactions found over '''5''' reactions in the full pathway
−
* [[PWY-5129]], sphingolipid biosynthesis (plants):
 
−
** '''4''' reactions found over '''13''' reactions in the full pathway
 
−
* [[PWY3DJ-12]], ceramide de novo biosynthesis:
 
−
** '''2''' reactions found over '''4''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
* METANETX-RXN : MNXR117664
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22642 22642]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R02978 R02978]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=3-ketodihydrosphingosine reductase}}
+
{{#set: common-name=n,n'-diacetylchitobiose synthase}}
−
{{#set: ec-number=ec-1.1.1.102}}
+
{{#set: ec-number=ec-3.2.1.202}}
 +
{{#set: synonymous=endolytic chitodextrinase}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=3}}
+
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus}}

Latest revision as of 11:19, 18 March 2021

Reaction RXN-12623

  • direction:
    • left-to-right
  • common-name:
    • n,n'-diacetylchitobiose synthase
  • ec-number:
  • synonymous:
    • endolytic chitodextrinase

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6902, chitin degradation II (Vibrio):
    • 3 reactions found over 5 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR117664






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