Difference between revisions of "RXN-12625"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-6427 RXN0-6427] == * direction: ** left-to-right * common-name: ** guanosine-3',5'-bis(diphosp...")
(Created page with "Category:reaction == Reaction RXN-12625 == * direction: ** left-to-right * common-name: ** n,n'-diacetylchitobiose β-n-acetylglucosaminidase * ec-number: ** [http://e...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-6427 RXN0-6427] ==
+
== Reaction RXN-12625 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** guanosine-3',5'-bis(diphosphate) 3'-diphosphatase
+
** n,n'-diacetylchitobiose β-n-acetylglucosaminidase
−
** guanosine 3'-diphosphate 5'-triphosphate 3'-diphosphatase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/3.1.7.2 ec-3.1.7.2]
+
** [http://enzyme.expasy.org/EC/3.2.1.52 ec-3.2.1.52]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[GDP-TP]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[GTP]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[CHITOBIOSE]][c] '''+''' 1 [[WATER]][c] '''=>''' 2 [[N-acetyl-D-glucosamine]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ10100]]
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* Gene: [[SJ10675]]
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** Category: [[annotation]]
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** Category: [[orthology]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* Gene: [[SJ13961]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ14690]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ07200]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PPGPPMET-PWY]], ppGpp biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PPGPPMET-PWY PPGPPMET-PWY]
+
* [[PWY-7822]], chitin degradation III (Serratia):
−
** '''5''' reactions found over '''6''' reactions in the full pathway
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** '''2''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-6902]], chitin degradation II (Vibrio):
 +
** '''3''' reactions found over '''5''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* METANETX-RXN : MNXR95628
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R00022 R00022]
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=33056 33056]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30674 30674]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=guanosine-3',5'-bis(diphosphate) 3'-diphosphatase|guanosine 3'-diphosphate 5'-triphosphate 3'-diphosphatase}}
+
{{#set: common-name=n,n'-diacetylchitobiose β-n-acetylglucosaminidase}}
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{{#set: ec-number=ec-3.1.7.2}}
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{{#set: ec-number=ec-3.2.1.52}}
−
{{#set: nb gene associated=4}}
+
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=2}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus}}

Latest revision as of 11:18, 18 March 2021

Reaction RXN-12625

  • direction:
    • left-to-right
  • common-name:
    • n,n'-diacetylchitobiose β-n-acetylglucosaminidase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7822, chitin degradation III (Serratia):
    • 2 reactions found over 7 reactions in the full pathway
  • PWY-6902, chitin degradation II (Vibrio):
    • 3 reactions found over 5 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR95628
  • LIGAND-RXN:
  • RHEA:





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