Difference between revisions of "RXN-12639"

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(Created page with "Category:reaction == Reaction PABASYN-RXN == * direction: ** reversible * common-name: ** 4-amino-4-deoxychorismate synthase * ec-number: ** [http://enzyme.expasy.org/EC/2...")
(Created page with "Category:reaction == Reaction RXN-13037 == * direction: ** left-to-right * common-name: ** octanoyl:gcvh transferase ** octanoyl transferase * ec-number: ** [http://enzyme...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction PABASYN-RXN ==
+
== Reaction RXN-13037 ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
* common-name:
 
* common-name:
−
** 4-amino-4-deoxychorismate synthase
+
** octanoyl:gcvh transferase
 +
** octanoyl transferase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.6.1.85 ec-2.6.1.85]
+
** [http://enzyme.expasy.org/EC/2.3.1.181 ec-2.3.1.181]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CHORISMATE]][c] '''+''' 1 [[GLN]][c] '''<=>''' 1 [[4-AMINO-4-DEOXYCHORISMATE]][c] '''+''' 1 [[GLT]][c]
+
* 1 [[Gcv-H]][c] '''+''' 1 [[Octanoyl-ACPs]][c] '''=>''' 1 [[ACP]][c] '''+''' 1 [[Octanoylated-Gcv-H]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ10268]]
+
* Gene: [[SJ19949]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ07132]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-6543]], 4-aminobenzoate biosynthesis:
+
* [[PWY-6987]], lipoate biosynthesis and incorporation III (Bacillus):
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
** '''2''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-7382]], lipoate biosynthesis and incorporation IV (yeast):
 +
** '''4''' reactions found over '''7''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: direction=left-to-right}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11675 11675]
+
{{#set: common-name=octanoyl transferase|octanoyl:gcvh transferase}}
−
* LIGAND-RXN:
+
{{#set: ec-number=ec-2.3.1.181}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R01716 R01716]
+
{{#set: nb gene associated=2}}
−
{{#set: direction=reversible}}
+
{{#set: nb pathway associated=2}}
−
{{#set: common-name=4-amino-4-deoxychorismate synthase}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: ec-number=ec-2.6.1.85}}
+
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: nb gene associated=1}}
 
−
{{#set: nb pathway associated=1}}
 
−
{{#set: reconstruction category=annotation|orthology}}
 
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 13:18, 14 January 2021

Reaction RXN-13037

  • direction:
    • left-to-right
  • common-name:
    • octanoyl:gcvh transferase
    • octanoyl transferase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6987, lipoate biosynthesis and incorporation III (Bacillus):
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-7382, lipoate biosynthesis and incorporation IV (yeast):
    • 4 reactions found over 7 reactions in the full pathway

Reconstruction information

External links

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=RXN-12639&oldid=90173"