Difference between revisions of "RXN-12645"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-308 RXN0-308] == * direction: ** left-to-right * common-name: ** l-cysteine:[protein cysteine]...")
(Created page with "Category:reaction == Reaction RXN-12645 == * direction: ** reversible * common-name: ** 3-ketodihydrosphinganine (c18) reductase * ec-number: ** [http://enzyme.expasy.org/...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-308 RXN0-308] ==
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== Reaction RXN-12645 ==
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
 
* common-name:
 
* common-name:
−
** l-cysteine:[protein cysteine] sulfurtransferase
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** 3-ketodihydrosphinganine (c18) reductase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.8.1.7 ec-2.8.1.7]
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** [http://enzyme.expasy.org/EC/1.1.1.102 ec-1.1.1.102]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CYS]][c] '''+''' 1 [[Cysteine-Desulfurase-L-cysteine]][c] '''=>''' 1 [[L-ALPHA-ALANINE]][c] '''+''' 1 [[L-Cysteine-Desulfurase-persulfide]][c]
+
* 1 [[CPD-13613]][c] '''+''' 1 [[NADP]][c] '''<=>''' 1 [[DEHYDROSPHINGANINE]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* Gene: [[SJ12778]]
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* Gene: [[SJ17324]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ03223]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ13485]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ04060]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ09474]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ19133]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
</div>
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-6891]], thiazole biosynthesis II (aerobic bacteria): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6891 PWY-6891]
 
−
** '''4''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY-6892]], thiazole biosynthesis I (facultative anaerobic bacteria): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6892 PWY-6892]
 
−
** '''5''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY0-1021]], L-alanine biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1021 PWY0-1021]
 
−
** '''1''' reactions found over '''1''' reactions in the full pathway
 
−
* [[PWY-6823]], molybdenum cofactor biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6823 PWY-6823]
 
−
** '''7''' reactions found over '''8''' reactions in the full pathway
 
−
* [[PWY-7904]], tRNA-uridine 2-thiolation (thermophilic bacteria): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7904 PWY-7904]
 
−
** '''1''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-7892]], tRNA-uridine 2-thiolation (bacteria): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7892 PWY-7892]
 
−
** '''3''' reactions found over '''8''' reactions in the full pathway
 
−
* [[PWY-7891]], tRNA-uridine 2-thiolation (yeast mitochondria): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7891 PWY-7891]
 
−
** '''1''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-7889]], tRNA-uridine 2-thiolation (mammalian mitochondria): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7889 PWY-7889]
 
−
** '''2''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-7888]], tRNA-uridine 2-thiolation (cytoplasmic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7888 PWY-7888]
 
−
** '''2''' reactions found over '''7''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* RHEA:
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* METANETX-RXN : MNXR117674
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17458 17458]
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{{#set: direction=reversible}}
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* LIGAND-RXN:
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{{#set: common-name=3-ketodihydrosphinganine (c18) reductase}}
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** [http://www.genome.jp/dbget-bin/www_bget?R07460 R07460]
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{{#set: ec-number=ec-1.1.1.102}}
−
{{#set: direction=left-to-right}}
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{{#set: nb gene associated=1}}
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{{#set: common-name=l-cysteine:[protein cysteine] sulfurtransferase}}
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{{#set: nb pathway associated=0}}
−
{{#set: ec-number=ec-2.8.1.7}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: nb gene associated=6}}
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{{#set: reconstruction tool=pathwaytools}}
−
{{#set: nb pathway associated=9}}
 
−
{{#set: reconstruction category=orthology|annotation}}
 
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Latest revision as of 11:19, 18 March 2021

Reaction RXN-12645

  • direction:
    • reversible
  • common-name:
    • 3-ketodihydrosphinganine (c18) reductase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

  • METANETX-RXN : MNXR117674





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