Difference between revisions of "RXN-12730"
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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.1.11.1-RXN 3.1.11.1-RXN] == * direction: ** left-to-right * common-name: ** exodeoxyribonuclease...") |
(Created page with "Category:reaction == Reaction RXN-12730 == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/2.1.1.14 ec-2.1.1.14] == Reaction formula == * 1 CP...") |
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| Line 1: | Line 1: | ||
[[Category:reaction]] | [[Category:reaction]] | ||
| − | == Reaction | + | == Reaction RXN-12730 == |
* direction: | * direction: | ||
** left-to-right | ** left-to-right | ||
| − | |||
| − | |||
* ec-number: | * ec-number: | ||
| − | ** [http://enzyme.expasy.org/EC/ | + | ** [http://enzyme.expasy.org/EC/2.1.1.14 ec-2.1.1.14] |
== Reaction formula == | == Reaction formula == | ||
| − | * 1 [[ | + | * 1 [[CPD-1302]][c] '''+''' 1 [[SELENOHOMOCYSTEINE]][c] '''=>''' 1 [[CPD-1301]][c] '''+''' 1 [[SELENOMETHIONINE]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
| − | * Gene: [[ | + | * Gene: [[SJ10794]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
| + | ** Category: [[orthology]] | ||
| + | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
== Pathway(s) == | == Pathway(s) == | ||
| + | * [[PWY-6936]], seleno-amino acid biosynthesis (plants): | ||
| + | ** '''5''' reactions found over '''5''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
| + | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
== External links == | == External links == | ||
| − | * | + | * METANETX-RXN : MNXR112794 |
| − | ** [http://www. | + | * RHEA: |
| − | * | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=45017 45017] |
| − | ** [http://www. | + | * LIGAND-RXN: |
| + | ** [http://www.genome.jp/dbget-bin/www_bget?R09365 R09365] | ||
{{#set: direction=left-to-right}} | {{#set: direction=left-to-right}} | ||
| − | + | {{#set: ec-number=ec-2.1.1.14}} | |
| − | {{#set: ec-number=ec- | ||
{{#set: nb gene associated=1}} | {{#set: nb gene associated=1}} | ||
| − | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=1}} |
| − | {{#set: reconstruction category=annotation}} | + | {{#set: reconstruction category=orthology|annotation}} |
| − | {{#set: reconstruction tool=pathwaytools}} | + | {{#set: reconstruction tool=pathwaytools|pantograph}} |
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
| − | {{#set: reconstruction source=saccharina_japonica_genome}} | + | {{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}} |
Latest revision as of 11:19, 18 March 2021
Contents
Reaction RXN-12730
- direction:
- left-to-right
- ec-number:
Reaction formula
- 1 CPD-1302[c] + 1 SELENOHOMOCYSTEINE[c] => 1 CPD-1301[c] + 1 SELENOMETHIONINE[c]
Gene(s) associated with this reaction
- Gene: SJ10794
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
Pathway(s)
- PWY-6936, seleno-amino acid biosynthesis (plants):
- 5 reactions found over 5 reactions in the full pathway
Reconstruction information
- category: orthology; source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
External links
