Difference between revisions of "RXN-12816"

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(Created page with "Category:reaction == Reaction OXALATE-DECARBOXYLASE-RXN == * direction: ** left-to-right * common-name: ** oxalate decarboxylase * ec-number: ** [http://enzyme.expasy.org/...")
(Created page with "Category:reaction == Reaction RXN0-2584 == * direction: ** left-to-right * common-name: ** uracil-dna glycosylase * ec-number: ** [http://enzyme.expasy.org/EC/3.2.2.27 ec-...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction OXALATE-DECARBOXYLASE-RXN ==
+
== Reaction RXN0-2584 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** oxalate decarboxylase
+
** uracil-dna glycosylase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/4.1.1.2 ec-4.1.1.2]
+
** [http://enzyme.expasy.org/EC/3.2.2.27 ec-3.2.2.27]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[OXALATE]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[FORMATE]][c]
+
* 1 [[DNA-with-Uracils]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[DNA-containing-a-Apyrimidinic-Sites]][c] '''+''' 1 [[URACIL]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ12638]]
+
* Gene: [[SJ03435]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ08942]]
+
* Gene: [[SJ19780]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ19782]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-6698]], oxalate degradation V:
 
−
** '''1''' reactions found over '''1''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
* METANETX-RXN : MNXR123144
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16509 16509]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R00522 R00522]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=oxalate decarboxylase}}
+
{{#set: common-name=uracil-dna glycosylase}}
−
{{#set: ec-number=ec-4.1.1.2}}
+
{{#set: ec-number=ec-3.2.2.27}}
−
{{#set: nb gene associated=2}}
+
{{#set: nb gene associated=3}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=0}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 08:33, 15 March 2021

Reaction RXN0-2584

  • direction:
    • left-to-right
  • common-name:
    • uracil-dna glycosylase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

  • METANETX-RXN : MNXR123144





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