Difference between revisions of "RXN-12816"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=NITRITE-REDUCTASE-CYTOCHROME-RXN NITRITE-REDUCTASE-CYTOCHROME-RXN] == * direction: ** left-to-right...")
(Created page with "Category:reaction == Reaction QUINOPRIBOTRANS-RXN == * direction: ** left-to-right * common-name: ** quinolinate phosphoribosyltransferase (decarboxylating) ** nicotinate-...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=NITRITE-REDUCTASE-CYTOCHROME-RXN NITRITE-REDUCTASE-CYTOCHROME-RXN] ==
+
== Reaction QUINOPRIBOTRANS-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** nitrite reductase (no-forming)
+
** quinolinate phosphoribosyltransferase (decarboxylating)
 +
** nicotinate-nucleotide diphosphorylase (carboxylating)
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.7.2.1 ec-1.7.2.1]
+
** [http://enzyme.expasy.org/EC/2.4.2.19 ec-2.4.2.19]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[Cytochromes-C-Reduced]][c] '''+''' 1 [[NITRITE]][c] '''+''' 2 [[PROTON]][c] '''=>''' 1 [[Cytochromes-C-Oxidized]][c] '''+''' 1 [[NITRIC-OXIDE]][c] '''+''' 1 [[WATER]][c]
+
* 2 [[PROTON]][c] '''+''' 1 [[PRPP]][c] '''+''' 1 [[QUINOLINATE]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[NICOTINATE_NUCLEOTIDE]][c] '''+''' 1 [[PPI]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ15937]]
+
* Gene: [[SJ19144]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ04451]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ11253]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[P303-PWY]], ammonia oxidation II (anaerobic): [http://metacyc.org/META/NEW-IMAGE?object=P303-PWY P303-PWY]
+
* [[PWY-5653]], NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde:
−
** '''1''' reactions found over '''3''' reactions in the full pathway
+
** '''3''' reactions found over '''4''' reactions in the full pathway
−
* [[PWY-6748]], nitrate reduction VII (denitrification): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6748 PWY-6748]
+
* [[PYRIDNUCSYN-PWY]], NAD de novo biosynthesis I (from aspartate):
−
** '''1''' reactions found over '''5''' reactions in the full pathway
+
** '''6''' reactions found over '''6''' reactions in the full pathway
−
* [[PWY-6523]], nitrite-dependent anaerobic methane oxidation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6523 PWY-6523]
+
* [[PWY-7342]], superpathway of nicotine biosynthesis:
−
** '''1''' reactions found over '''3''' reactions in the full pathway
+
** '''4''' reactions found over '''9''' reactions in the full pathway
−
* [[PWY-7084]], nitrifier denitrification: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7084 PWY-7084]
+
* [[PWY-5316]], nicotine biosynthesis:
−
** '''1''' reactions found over '''4''' reactions in the full pathway
+
** '''3''' reactions found over '''9''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12735 12735]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00783 R00783]
+
** [http://www.genome.jp/dbget-bin/www_bget?R03348 R03348]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/Q06006 Q06006]
+
** [http://www.uniprot.org/uniprot/Q9JSX8 Q9JSX8]
−
** [http://www.uniprot.org/uniprot/Q52519 Q52519]
+
** [http://www.uniprot.org/uniprot/Q57916 Q57916]
−
** [http://www.uniprot.org/uniprot/P24474 P24474]
+
** [http://www.uniprot.org/uniprot/P30011 P30011]
 +
** [http://www.uniprot.org/uniprot/P46714 P46714]
 +
** [http://www.uniprot.org/uniprot/Q15274 Q15274]
 +
** [http://www.uniprot.org/uniprot/P77938 P77938]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=nitrite reductase (no-forming)}}
+
{{#set: common-name=nicotinate-nucleotide diphosphorylase (carboxylating)|quinolinate phosphoribosyltransferase (decarboxylating)}}
−
{{#set: ec-number=ec-1.7.2.1}}
+
{{#set: ec-number=ec-2.4.2.19}}
−
{{#set: nb gene associated=1}}
+
{{#set: nb gene associated=3}}
 
{{#set: nb pathway associated=4}}
 
{{#set: nb pathway associated=4}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=annotation|orthology}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus|output_pantograph_nannochloropsis_salina|output_pantograph_arabidopsis_thaliana}}

Revision as of 20:40, 18 December 2020

Reaction QUINOPRIBOTRANS-RXN

  • direction:
    • left-to-right
  • common-name:
    • quinolinate phosphoribosyltransferase (decarboxylating)
    • nicotinate-nucleotide diphosphorylase (carboxylating)
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-5653, NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde:
    • 3 reactions found over 4 reactions in the full pathway
  • PYRIDNUCSYN-PWY, NAD de novo biosynthesis I (from aspartate):
    • 6 reactions found over 6 reactions in the full pathway
  • PWY-7342, superpathway of nicotine biosynthesis:
    • 4 reactions found over 9 reactions in the full pathway
  • PWY-5316, nicotine biosynthesis:
    • 3 reactions found over 9 reactions in the full pathway

Reconstruction information

External links





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