Difference between revisions of "RXN-12850"

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(Created page with "Category:reaction == Reaction 3.1.4.17-RXN == * direction: ** left-to-right * common-name: ** 3',5'-cyclic-nucleotide phosphodiesterase * ec-number: ** [http://enzyme.expa...")
(Created page with "Category:reaction == Reaction RXN-12850 == * direction: ** left-to-right * common-name: ** cholest-4-en-3-one 26-monooxygenase == Reaction formula == * 1 CPD-13887[c]...")
 
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction 3.1.4.17-RXN ==
+
== Reaction RXN-12850 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** 3',5'-cyclic-nucleotide phosphodiesterase
+
** cholest-4-en-3-one 26-monooxygenase
−
* ec-number:
 
−
** [http://enzyme.expasy.org/EC/3.1.4.17 ec-3.1.4.17]
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[Cyclic-3-5-Nucleoside-Monophosphates]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[Nucleoside-Monophosphates]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[CPD-13887]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CPD-13888]][c] '''+''' 1 [[NAD]][c] '''+''' 2 [[WATER]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* Gene: [[SJ20106]]
−
* Gene: [[SJ04705]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* Gene: [[SJ18680]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ14703]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ03999]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ18679]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ09726]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ14526]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ10845]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
</div>
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-6945]], cholesterol degradation to androstenedione I (cholesterol oxidase):
 +
** '''5''' reactions found over '''17''' reactions in the full pathway
 +
* [[PWY-6946]], cholesterol degradation to androstenedione II (cholesterol dehydrogenase):
 +
** '''6''' reactions found over '''22''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* LIGAND-RXN:
−
* METANETX-RXN : MNXR115300
+
** [http://www.genome.jp/dbget-bin/www_bget?R11355 R11355]
 +
* METANETX-RXN : MNXR114652
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14654 14654]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=43945 43945]
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R03259 R03259]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P12019 P12019]
 
−
** [http://www.uniprot.org/uniprot/Q56686 Q56686]
 
−
** [http://www.uniprot.org/uniprot/P14099 P14099]
 
−
** [http://www.uniprot.org/uniprot/Q01066 Q01066]
 
−
** [http://www.uniprot.org/uniprot/Q01061 Q01061]
 
−
** [http://www.uniprot.org/uniprot/P14100 P14100]
 
−
** [http://www.uniprot.org/uniprot/Q01065 Q01065]
 
−
** [http://www.uniprot.org/uniprot/P27815 P27815]
 
−
** [http://www.uniprot.org/uniprot/O66909 O66909]
 
−
** [http://www.uniprot.org/uniprot/P14270 P14270]
 
−
** [http://www.uniprot.org/uniprot/O27755 O27755]
 
−
** [http://www.uniprot.org/uniprot/P44685 P44685]
 
−
** [http://www.uniprot.org/uniprot/P22434 P22434]
 
−
** [http://www.uniprot.org/uniprot/P0AEW4 P0AEW4]
 
−
** [http://www.uniprot.org/uniprot/O26280 O26280]
 
−
** [http://www.uniprot.org/uniprot/O06629 O06629]
 
−
** [http://www.uniprot.org/uniprot/O30241 O30241]
 
−
** [http://www.uniprot.org/uniprot/P14644 P14644]
 
−
** [http://www.uniprot.org/uniprot/P54748 P54748]
 
−
** [http://www.uniprot.org/uniprot/Q13945 Q13945]
 
−
** [http://www.uniprot.org/uniprot/Q01062 Q01062]
 
−
** [http://www.uniprot.org/uniprot/P54827 P54827]
 
−
** [http://www.uniprot.org/uniprot/Q01064 Q01064]
 
−
** [http://www.uniprot.org/uniprot/Q9NP56 Q9NP56]
 
−
** [http://www.uniprot.org/uniprot/O60658 O60658]
 
−
** [http://www.uniprot.org/uniprot/P36599 P36599]
 
−
** [http://www.uniprot.org/uniprot/P30645 P30645]
 
−
** [http://www.uniprot.org/uniprot/Q45859 Q45859]
 
−
** [http://www.uniprot.org/uniprot/P12252 P12252]
 
−
** [http://www.uniprot.org/uniprot/P06776 P06776]
 
−
** [http://www.uniprot.org/uniprot/Q08493 Q08493]
 
−
** [http://www.uniprot.org/uniprot/Q63421 Q63421]
 
−
</div>
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=3',5'-cyclic-nucleotide phosphodiesterase}}
+
{{#set: common-name=cholest-4-en-3-one 26-monooxygenase}}
−
{{#set: ec-number=ec-3.1.4.17}}
+
{{#set: nb gene associated=1}}
−
{{#set: nb gene associated=8}}
+
{{#set: nb pathway associated=2}}
−
{{#set: nb pathway associated=0}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction category=orthology|annotation}}
+
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Latest revision as of 11:19, 18 March 2021

Reaction RXN-12850

  • direction:
    • left-to-right
  • common-name:
    • cholest-4-en-3-one 26-monooxygenase

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6945, cholesterol degradation to androstenedione I (cholesterol oxidase):
    • 5 reactions found over 17 reactions in the full pathway
  • PWY-6946, cholesterol degradation to androstenedione II (cholesterol dehydrogenase):
    • 6 reactions found over 22 reactions in the full pathway

Reconstruction information

External links

  • LIGAND-RXN:
  • METANETX-RXN : MNXR114652
  • RHEA:





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