Difference between revisions of "RXN-12850"

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(Created page with "Category:reaction == Reaction RXN-10708 == * direction: ** left-to-right * common-name: ** acyl-coa hydrolase * ec-number: ** [http://enzyme.expasy.org/EC/3.1.2.20 ec-3.1....")
(Created page with "Category:reaction == Reaction TIGLYLCOA-HYDROXY-RXN == * direction: ** reversible * common-name: ** tiglyl-coa hydratase ** enoyl-coa hydratase ** tiglyl-coa hydrase * ec-...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-10708 ==
+
== Reaction TIGLYLCOA-HYDROXY-RXN ==
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
 
* common-name:
 
* common-name:
−
** acyl-coa hydrolase
+
** tiglyl-coa hydratase
 +
** enoyl-coa hydratase
 +
** tiglyl-coa hydrase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/3.1.2.20 ec-3.1.2.20]
+
** [http://enzyme.expasy.org/EC/4.2.1.17 ec-4.2.1.17]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CPD-11529]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CO-A]][c] '''+''' 1 [[CPD-731]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[2-METHYL-3-HYDROXY-BUTYRYL-COA]][c] '''<=>''' 1 [[CPD-1083]][c] '''+''' 1 [[WATER]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ09637]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* Gene: [[SJ14591]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* Gene: [[SJ09703]]
+
* Gene: [[SJ03584]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* Gene: [[SJ18316]]
+
* Gene: [[SJ03913]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ10275]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ21390]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ07211]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
</div>
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-735]], jasmonic acid biosynthesis:
+
* [[ILEUDEG-PWY]], L-isoleucine degradation I:
−
** '''16''' reactions found over '''19''' reactions in the full pathway
+
** '''5''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-5109]], fermentation to 2-methylbutanoate:
 +
** '''3''' reactions found over '''6''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
{{#set: direction=left-to-right}}
+
* RHEA:
−
{{#set: common-name=acyl-coa hydrolase}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=31122 31122]
−
{{#set: ec-number=ec-3.1.2.20}}
+
* LIGAND-RXN:
−
{{#set: nb gene associated=3}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R04204 R04204]
−
{{#set: nb pathway associated=1}}
+
{{#set: direction=reversible}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: common-name=tiglyl-coa hydratase|tiglyl-coa hydrase|enoyl-coa hydratase}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: ec-number=ec-4.2.1.17}}
 +
{{#set: nb gene associated=6}}
 +
{{#set: nb pathway associated=2}}
 +
{{#set: reconstruction category=annotation|orthology}}
 +
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}

Revision as of 13:14, 14 January 2021

Reaction TIGLYLCOA-HYDROXY-RXN

  • direction:
    • reversible
  • common-name:
    • tiglyl-coa hydratase
    • enoyl-coa hydratase
    • tiglyl-coa hydrase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • ILEUDEG-PWY, L-isoleucine degradation I:
    • 5 reactions found over 6 reactions in the full pathway
  • PWY-5109, fermentation to 2-methylbutanoate:
    • 3 reactions found over 6 reactions in the full pathway

Reconstruction information

External links





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