Difference between revisions of "RXN-12889"
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(Created page with "Category:reaction == Reaction RXN-11855 == * direction: ** left-to-right * common-name: ** rna (cytosine38-c5)-methyltransferase * ec-number: ** [http://enzyme.expasy.org/...") |
(Created page with "Category:reaction == Reaction PALMITOYL-COA-HYDROLASE-RXN == * direction: ** left-to-right * common-name: ** palmitoyl-coa hydrolase * ec-number: ** [http://enzyme.expasy....") |
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| Line 1: | Line 1: | ||
[[Category:reaction]] | [[Category:reaction]] | ||
| − | == Reaction RXN | + | == Reaction PALMITOYL-COA-HYDROLASE-RXN == |
* direction: | * direction: | ||
** left-to-right | ** left-to-right | ||
* common-name: | * common-name: | ||
| − | ** | + | ** palmitoyl-coa hydrolase |
* ec-number: | * ec-number: | ||
| − | ** [http://enzyme.expasy.org/EC/ | + | ** [http://enzyme.expasy.org/EC/3.1.2.2 ec-3.1.2.2] |
== Reaction formula == | == Reaction formula == | ||
| − | * 1 [[ | + | * 1 [[PALMITYL-COA]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CO-A]][c] '''+''' 1 [[PALMITATE]][c] '''+''' 1 [[PROTON]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
| − | * Gene: [[ | + | * Gene: [[SJ18316]] |
| + | ** Category: [[orthology]] | ||
| + | *** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
| + | * Gene: [[SJ09703]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: | + | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a |
== Pathway(s) == | == Pathway(s) == | ||
| + | * [[PWY-321]], cutin biosynthesis: | ||
| + | ** '''3''' reactions found over '''16''' reactions in the full pathway | ||
| + | * [[PWY-5994]], palmitate biosynthesis (animals and fungi, cytoplasm): | ||
| + | ** '''31''' reactions found over '''31''' reactions in the full pathway | ||
| + | * [[PWY-1121]], suberin monomers biosynthesis: | ||
| + | ** '''9''' reactions found over '''19''' reactions in the full pathway | ||
| + | * [[PWY-6733]], sporopollenin precursors biosynthesis: | ||
| + | ** '''8''' reactions found over '''18''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
| + | * category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | ||
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
== External links == | == External links == | ||
* RHEA: | * RHEA: | ||
| − | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id= | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16645 16645] |
* LIGAND-RXN: | * LIGAND-RXN: | ||
| − | ** [http://www.genome.jp/dbget-bin/www_bget? | + | ** [http://www.genome.jp/dbget-bin/www_bget?R01274 R01274] |
| + | * UNIPROT: | ||
| + | ** [http://www.uniprot.org/uniprot/Q64559 Q64559] | ||
| + | ** [http://www.uniprot.org/uniprot/O14734 O14734] | ||
{{#set: direction=left-to-right}} | {{#set: direction=left-to-right}} | ||
| − | {{#set: common-name= | + | {{#set: common-name=palmitoyl-coa hydrolase}} |
| − | {{#set: ec-number=ec- | + | {{#set: ec-number=ec-3.1.2.2}} |
| − | {{#set: nb gene associated= | + | {{#set: nb gene associated=2}} |
| − | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=4}} |
| − | {{#set: reconstruction category=annotation}} | + | {{#set: reconstruction category=annotation|orthology}} |
| − | {{#set: reconstruction tool=pathwaytools}} | + | {{#set: reconstruction tool=pathwaytools|pantograph}} |
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
| − | {{#set: reconstruction source=saccharina_japonica_genome}} | + | {{#set: reconstruction source=output_pantograph_nannochloropsis_salina|saccharina_japonica_genome}} |
Revision as of 19:00, 14 January 2021
Contents
Reaction PALMITOYL-COA-HYDROLASE-RXN
- direction:
- left-to-right
- common-name:
- palmitoyl-coa hydrolase
- ec-number:
Reaction formula
- 1 PALMITYL-COA[c] + 1 WATER[c] => 1 CO-A[c] + 1 PALMITATE[c] + 1 PROTON[c]
Gene(s) associated with this reaction
- Gene: SJ18316
- Category: orthology
- Source: output_pantograph_nannochloropsis_salina, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: orthology
- Gene: SJ09703
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: annotation
Pathway(s)
- PWY-321, cutin biosynthesis:
- 3 reactions found over 16 reactions in the full pathway
- PWY-5994, palmitate biosynthesis (animals and fungi, cytoplasm):
- 31 reactions found over 31 reactions in the full pathway
- PWY-1121, suberin monomers biosynthesis:
- 9 reactions found over 19 reactions in the full pathway
- PWY-6733, sporopollenin precursors biosynthesis:
- 8 reactions found over 18 reactions in the full pathway
Reconstruction information
- category: orthology; source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
External links
