Difference between revisions of "RXN-12889"

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(Created page with "Category:reaction == Reaction ENOYL-ACP-REDUCT-NADH-RXN == * direction: ** left-to-right * common-name: ** 2,3,4-saturated-fatty-acid-[acp] reductase ** 2,3,4-saturated fa...")
(Created page with "Category:reaction == Reaction RXN-11486 == * direction: ** left-to-right * common-name: ** trans-octaprenyltranstransferase * ec-number: ** [http://enzyme.expasy.org/EC/2....")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction ENOYL-ACP-REDUCT-NADH-RXN ==
+
== Reaction RXN-11486 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** 2,3,4-saturated-fatty-acid-[acp] reductase
+
** trans-octaprenyltranstransferase
−
** 2,3,4-saturated fatty acyl-[acp]:nad+ oxidoreductase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.3.1.9 ec-1.3.1.9]
+
** [http://enzyme.expasy.org/EC/2.5.1.85 ec-2.5.1.85]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[NADH]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[TRANS-D2-ENOYL-ACP]][c] '''=>''' 1 [[NAD]][c] '''+''' 1 [[Saturated-Fatty-Acyl-ACPs]][c]
+
* 5 [[DELTA3-ISOPENTENYL-PP]][c] '''+''' 1 [[GERANYLGERANYL-PP]][c] '''=>''' 5 [[PPI]][c] '''+''' 1 [[SOLANESYL-PYROPHOSPHATE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ00320]]
+
* Gene: [[SJ10418]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* Gene: [[SJ03883]]
+
* Gene: [[SJ19255]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[FASYN-ELONG-PWY]], fatty acid elongation -- saturated:
+
* [[PWY-6520]], nonaprenyl diphosphate biosynthesis II:
−
** '''5''' reactions found over '''5''' reactions in the full pathway
+
** '''1''' reactions found over '''1''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* METANETX-RXN : MNXR112686
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27595 27595]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R01403 R01403]
+
** [http://www.genome.jp/dbget-bin/www_bget?R09251 R09251]
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P16657 P16657]
 
−
** [http://www.uniprot.org/uniprot/O24990 O24990]
 
−
** [http://www.uniprot.org/uniprot/Q9JSS8 Q9JSS8]
 
−
** [http://www.uniprot.org/uniprot/P0A5Y6 P0A5Y6]
 
−
** [http://www.uniprot.org/uniprot/O84106 O84106]
 
−
** [http://www.uniprot.org/uniprot/Q9PMQ7 Q9PMQ7]
 
−
** [http://www.uniprot.org/uniprot/P07149 P07149]
 
−
** [http://www.uniprot.org/uniprot/P0AEK4 P0AEK4]
 
−
** [http://www.uniprot.org/uniprot/Q51891 Q51891]
 
−
** [http://www.uniprot.org/uniprot/O04945 O04945]
 
−
** [http://www.uniprot.org/uniprot/O04946 O04946]
 
−
** [http://www.uniprot.org/uniprot/O24207 O24207]
 
−
** [http://www.uniprot.org/uniprot/P93062 P93062]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=2,3,4-saturated fatty acyl-[acp]:nad+ oxidoreductase|2,3,4-saturated-fatty-acid-[acp] reductase}}
+
{{#set: common-name=trans-octaprenyltranstransferase}}
−
{{#set: ec-number=ec-1.3.1.9}}
+
{{#set: ec-number=ec-2.5.1.85}}
 
{{#set: nb gene associated=2}}
 
{{#set: nb gene associated=2}}
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Revision as of 08:32, 15 March 2021

Reaction RXN-11486

  • direction:
    • left-to-right
  • common-name:
    • trans-octaprenyltranstransferase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6520, nonaprenyl diphosphate biosynthesis II:
    • 1 reactions found over 1 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR112686
  • RHEA:
  • LIGAND-RXN:





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