Difference between revisions of "RXN-12959"

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(Created page with "Category:reaction == Reaction RXN-8032 == * direction: ** reversible * common-name: ** 3-ketopimelyl-coa thiolase * ec-number: ** [http://enzyme.expasy.org/EC/2.3.1 ec-2.3...")
(Created page with "Category:reaction == Reaction RXN-17893 == * direction: ** left-to-right * common-name: ** nα-acetyl-l-methionine-peptidase * ec-number: ** [http://enzyme.expasy.org...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
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== Reaction RXN-8032 ==
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== Reaction RXN-17893 ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
* common-name:
 
* common-name:
−
** 3-ketopimelyl-coa thiolase
+
** nα-acetyl-l-methionine-peptidase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.3.1 ec-2.3.1]
+
** [http://enzyme.expasy.org/EC/3.4.19.1 ec-3.4.19.1]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[3-OXOPIMELOYL-COA]][c] '''+''' 1 [[CO-A]][c] '''<=>''' 1 [[ACETYL-COA]][c] '''+''' 1 [[GLUTARYL-COA]][c]
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* 1 [[N-Ac-L-methionyl-L-glutaminyl-Protein]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CPD0-2015]][c] '''+''' 1 [[L-Glutaminyl-Peptides]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ15041]]
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* Gene: [[SJ02307]]
−
** Category: [[orthology]]
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** Category: [[annotation]]
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
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* [[P321-PWY]], benzoyl-CoA degradation III (anaerobic):
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* [[PWY-7799]], Arg/N-end rule pathway (eukaryotic):
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** '''1''' reactions found over '''9''' reactions in the full pathway
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** '''7''' reactions found over '''14''' reactions in the full pathway
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* [[PWY-7401]], crotonate fermentation (to acetate and cyclohexane carboxylate):
 
−
** '''6''' reactions found over '''15''' reactions in the full pathway
 
−
* [[CENTBENZCOA-PWY]], benzoyl-CoA degradation II (anaerobic):
 
−
** '''1''' reactions found over '''7''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
* LIGAND-RXN:
+
{{#set: direction=left-to-right}}
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** [http://www.genome.jp/dbget-bin/www_bget?R05586 R05586]
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{{#set: common-name=n&alpha;-acetyl-l-methionine-peptidase}}
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{{#set: direction=reversible}}
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{{#set: ec-number=ec-3.4.19.1}}
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{{#set: common-name=3-ketopimelyl-coa thiolase}}
 
−
{{#set: ec-number=ec-2.3.1}}
 
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=3}}
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{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=orthology}}
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{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 11:20, 15 January 2021

Reaction RXN-17893

  • direction:
    • left-to-right
  • common-name:
    • nα-acetyl-l-methionine-peptidase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7799, Arg/N-end rule pathway (eukaryotic):
    • 7 reactions found over 14 reactions in the full pathway

Reconstruction information

External links

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=RXN-12959&oldid=113854"