Difference between revisions of "RXN-12969"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=UDP-GLUCURONATE-4-EPIMERASE-RXN UDP-GLUCURONATE-4-EPIMERASE-RXN] == * direction: ** reversible * co...")
(Created page with "Category:reaction == Reaction RXN-12969 == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/4.2.1.134 ec-4.2.1.134] == Reaction formula == * 1 ...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=UDP-GLUCURONATE-4-EPIMERASE-RXN UDP-GLUCURONATE-4-EPIMERASE-RXN] ==
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== Reaction RXN-12969 ==
 
* direction:
 
* direction:
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** reversible
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** left-to-right
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* common-name:
 
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** udp-glucuronate 4-epimerase
 
 
* ec-number:
 
* ec-number:
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** [http://enzyme.expasy.org/EC/5.1.3.6 ec-5.1.3.6]
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** [http://enzyme.expasy.org/EC/4.2.1.134 ec-4.2.1.134]
 
== Reaction formula ==
 
== Reaction formula ==
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* 1 [[UDP-GLUCURONATE]][c] '''<=>''' 1 [[UDP-D-GALACTURONATE]][c]
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* 1 [[CPD-14405]][c] '''=>''' 1 [[CPD-14406]][c] '''+''' 1 [[WATER]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* Gene: [[SJ06882]]
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* Gene: [[SJ01092]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
** Category: [[orthology]]
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* Gene: [[SJ00783]]
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*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ10400]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ19982]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ04385]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
</div>
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-4861]], UDP-&alpha;-D-galacturonate biosynthesis I (from UDP-D-glucuronate): [http://metacyc.org/META/NEW-IMAGE?object=PWY-4861 PWY-4861]
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* [[PWY-7592]], arachidonate biosynthesis III (6-desaturase, mammals):
−
** '''1''' reactions found over '''1''' reactions in the full pathway
+
** '''5''' reactions found over '''5''' reactions in the full pathway
−
* [[PWY-6415]], L-ascorbate biosynthesis V: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6415 PWY-6415]
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* [[PWY-5353]], arachidonate biosynthesis I (6-desaturase, lower eukaryotes):
−
** '''4''' reactions found over '''7''' reactions in the full pathway
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** '''7''' reactions found over '''8''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* RHEA:
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* METANETX-RXN : MNXR117827
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11407 11407]
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{{#set: direction=left-to-right}}
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* LIGAND-RXN:
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{{#set: ec-number=ec-4.2.1.134}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01385 R01385]
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{{#set: nb gene associated=2}}
−
{{#set: direction=reversible}}
 
−
{{#set: common-name=udp-glucuronate 4-epimerase}}
 
−
{{#set: ec-number=ec-5.1.3.6}}
 
−
{{#set: nb gene associated=4}}
 
 
{{#set: nb pathway associated=2}}
 
{{#set: nb pathway associated=2}}
−
{{#set: reconstruction category=annotation|orthology}}
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{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
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{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|saccharina_japonica_genome}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Latest revision as of 11:22, 18 March 2021

Reaction RXN-12969

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7592, arachidonate biosynthesis III (6-desaturase, mammals):
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-5353, arachidonate biosynthesis I (6-desaturase, lower eukaryotes):
    • 7 reactions found over 8 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR117827





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