Difference between revisions of "RXN-13029"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN3O-102 RXN3O-102] == * direction: ** left-to-right * common-name: ** 3-demethylubiquinol-6 3-o-m...")
 
(Created page with "Category:reaction == Reaction RXN-13029 == * direction: ** reversible * common-name: ** (s)-ethylmalonyl-coa decarboxylase * ec-number: ** [http://enzyme.expasy.org/EC/4.1...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN3O-102 RXN3O-102] ==
+
== Reaction RXN-13029 ==
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
 
* common-name:
 
* common-name:
−
** 3-demethylubiquinol-6 3-o-methyltransferase
+
** (s)-ethylmalonyl-coa decarboxylase
−
** s-adenosyl-l-methionine:2-hexaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4-benzoquinol o-methyltransferase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.1.1.64 ec-2.1.1.64]
+
** [http://enzyme.expasy.org/EC/4.1.1.94 ec-4.1.1.94]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[2-HEXAPRENYL-3-METHYL-5-HYDROXY-6-METHOX]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[UBIQUINOL-30]][c]
+
* 1 [[CPD-9406]][c] '''+''' 1 [[PROTON]][c] '''<=>''' 1 [[BUTYRYL-COA]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ13007]]
+
* Gene: [[SJ14591]]
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ16864]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY3O-19]], ubiquinol-6 biosynthesis from 4-hydroxybenzoate (eukaryotic): [http://metacyc.org/META/NEW-IMAGE?object=PWY3O-19 PWY3O-19]
 
−
** '''4''' reactions found over '''8''' reactions in the full pathway
 
−
* [[PWY-7230]], ubiquinol-6 biosynthesis from 4-aminobenzoate (yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7230 PWY-7230]
 
−
** '''3''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-7233]], ubiquinol-6 bypass biosynthesis (eukaryotic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7233 PWY-7233]
 
−
** '''3''' reactions found over '''10''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* METANETX-RXN : MNXR113354
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R09958 R09958]
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=44401 44401]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=32134 32134]
−
* LIGAND-RXN:
+
{{#set: direction=reversible}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R02175 R02175]
+
{{#set: common-name=(s)-ethylmalonyl-coa decarboxylase}}
−
{{#set: direction=left-to-right}}
+
{{#set: ec-number=ec-4.1.1.94}}
−
{{#set: common-name=3-demethylubiquinol-6 3-o-methyltransferase|s-adenosyl-l-methionine:2-hexaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4-benzoquinol o-methyltransferase}}
+
{{#set: nb gene associated=1}}
−
{{#set: ec-number=ec-2.1.1.64}}
+
{{#set: nb pathway associated=0}}
−
{{#set: nb gene associated=2}}
 
−
{{#set: nb pathway associated=3}}
 
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}

Latest revision as of 11:21, 18 March 2021

Reaction RXN-13029

  • direction:
    • reversible
  • common-name:
    • (s)-ethylmalonyl-coa decarboxylase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

  • METANETX-RXN : MNXR113354
  • LIGAND-RXN:
  • RHEA:





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