Difference between revisions of "RXN-13029"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.7.7.15-RXN 2.7.7.15-RXN] == * direction: ** left-to-right * common-name: ** choline-phosphate cyt...")
(Created page with "Category:reaction == Reaction RXN-13029 == * direction: ** reversible * common-name: ** (s)-ethylmalonyl-coa decarboxylase * ec-number: ** [http://enzyme.expasy.org/EC/4.1...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.7.7.15-RXN 2.7.7.15-RXN] ==
+
== Reaction RXN-13029 ==
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
 
* common-name:
 
* common-name:
−
** choline-phosphate cytidylyltransferase
+
** (s)-ethylmalonyl-coa decarboxylase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.7.7.15 ec-2.7.7.15]
+
** [http://enzyme.expasy.org/EC/4.1.1.94 ec-4.1.1.94]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CTP]][c] '''+''' 1 [[PHOSPHORYL-CHOLINE]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CDP-CHOLINE]][c] '''+''' 1 [[PPI]][c]
+
* 1 [[CPD-9406]][c] '''+''' 1 [[PROTON]][c] '''<=>''' 1 [[BUTYRYL-COA]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ19268]]
+
* Gene: [[SJ14591]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-7886]], cell-surface glycoconjugate-linked phosphocholine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7886 PWY-7886]
 
−
** '''2''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY3O-450]], phosphatidylcholine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY3O-450 PWY3O-450]
 
−
** '''3''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-3561]], choline biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3561 PWY-3561]
 
−
** '''3''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-7818]], type IV lipoteichoic acid biosynthesis (S. pneumoniae): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7818 PWY-7818]
 
−
** '''2''' reactions found over '''19''' reactions in the full pathway
 
−
* [[PWY4FS-2]], phosphatidylcholine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY4FS-2 PWY4FS-2]
 
−
** '''2''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-7782]], plasmalogen biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7782 PWY-7782]
 
−
** '''11''' reactions found over '''16''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 +
* METANETX-RXN : MNXR113354
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R09958 R09958]
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18998 18998]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=32134 32134]
−
* LIGAND-RXN:
+
{{#set: direction=reversible}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R01890 R01890]
+
{{#set: common-name=(s)-ethylmalonyl-coa decarboxylase}}
−
* UNIPROT:
+
{{#set: ec-number=ec-4.1.1.94}}
−
** [http://www.uniprot.org/uniprot/P19836 P19836]
 
−
** [http://www.uniprot.org/uniprot/P49586 P49586]
 
−
** [http://www.uniprot.org/uniprot/P49584 P49584]
 
−
** [http://www.uniprot.org/uniprot/P49585 P49585]
 
−
** [http://www.uniprot.org/uniprot/P49587 P49587]
 
−
** [http://www.uniprot.org/uniprot/P93470 P93470]
 
−
** [http://www.uniprot.org/uniprot/Q42619 Q42619]
 
−
** [http://www.uniprot.org/uniprot/Q42620 Q42620]
 
−
** [http://www.uniprot.org/uniprot/Q42621 Q42621]
 
−
** [http://www.uniprot.org/uniprot/Q42622 Q42622]
 
−
** [http://www.uniprot.org/uniprot/P13259 P13259]
 
−
{{#set: direction=left-to-right}}
 
−
{{#set: common-name=choline-phosphate cytidylyltransferase}}
 
−
{{#set: ec-number=ec-2.7.7.15}}
 
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=6}}
+
{{#set: nb pathway associated=0}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus|output_pantograph_arabidopsis_thaliana|output_pantograph_nannochloropsis_salina}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Latest revision as of 11:21, 18 March 2021

Reaction RXN-13029

  • direction:
    • reversible
  • common-name:
    • (s)-ethylmalonyl-coa decarboxylase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

  • METANETX-RXN : MNXR113354
  • LIGAND-RXN:
  • RHEA:





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