Difference between revisions of "RXN-13142"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12613 RXN-12613] == * direction: ** left-to-right * common-name: ** thiaminase * ec-number: **...")
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PREPHENATEDEHYDRAT-RXN PREPHENATEDEHYDRAT-RXN] == * direction: ** reversible * common-name: ** prep...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12613 RXN-12613] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PREPHENATEDEHYDRAT-RXN PREPHENATEDEHYDRAT-RXN] ==
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
 
* common-name:
 
* common-name:
−
** thiaminase
+
** prephenate dehydratase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/3.5.99.2 ec-3.5.99.2]
+
** [http://enzyme.expasy.org/EC/4.2.1.51 ec-4.2.1.51]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CPD-13578]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[AMMONIUM]][c] '''+''' 1 [[HMP]][c]
+
* 1 [[PREPHENATE]][c] '''+''' 1 [[PROTON]][c] '''<=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[PHENYL-PYRUVATE]][c] '''+''' 1 [[WATER]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ02191]]
+
* Gene: [[SJ00045]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-6899]], base-degraded thiamine salvage: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6899 PWY-6899]
+
* [[PHESYN]], L-phenylalanine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PHESYN PHESYN]
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
** '''3''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-7432]], L-phenylalanine biosynthesis III (cytosolic, plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7432 PWY-7432]
 +
** '''3''' reactions found over '''2''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21651 21651]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R09993 R09993]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01373 R01373]
−
* RHEA:
+
* UNIPROT:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=31802 31802]
+
** [http://www.uniprot.org/uniprot/P27603 P27603]
−
{{#set: direction=left-to-right}}
+
** [http://www.uniprot.org/uniprot/P43900 P43900]
−
{{#set: common-name=thiaminase}}
+
** [http://www.uniprot.org/uniprot/P21203 P21203]
−
{{#set: ec-number=ec-3.5.99.2}}
+
** [http://www.uniprot.org/uniprot/Q58054 Q58054]
 +
** [http://www.uniprot.org/uniprot/Q9CEU2 Q9CEU2]
 +
** [http://www.uniprot.org/uniprot/Q9PII3 Q9PII3]
 +
** [http://www.uniprot.org/uniprot/P0A9J8 P0A9J8]
 +
** [http://www.uniprot.org/uniprot/Q02286 Q02286]
 +
** [http://www.uniprot.org/uniprot/P43909 P43909]
 +
** [http://www.uniprot.org/uniprot/P32452 P32452]
 +
{{#set: direction=reversible}}
 +
{{#set: common-name=prephenate dehydratase}}
 +
{{#set: ec-number=ec-4.2.1.51}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=2}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=annotation|orthology}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Revision as of 09:30, 27 August 2019

Reaction PREPHENATEDEHYDRAT-RXN

  • direction:
    • reversible
  • common-name:
    • prephenate dehydratase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PHESYN, L-phenylalanine biosynthesis I: PHESYN
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-7432, L-phenylalanine biosynthesis III (cytosolic, plants): PWY-7432
    • 3 reactions found over 2 reactions in the full pathway

Reconstruction information

External links





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