Difference between revisions of "RXN-13161"

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(Created page with "Category:reaction == Reaction DIPHOSPHOMEVALONTE-DECARBOXYLASE-RXN == * direction: ** left-to-right * common-name: ** diphosphomevalonate decarboxylase * ec-number: ** [ht...")
(Created page with "Category:reaction == Reaction RXN-13161 == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/1.13.11.18 ec-1.13.11.18] == Reaction formula == * 1...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction DIPHOSPHOMEVALONTE-DECARBOXYLASE-RXN ==
+
== Reaction RXN-13161 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
−
* common-name:
 
−
** diphosphomevalonate decarboxylase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/4.1.1.33 ec-4.1.1.33]
+
** [http://enzyme.expasy.org/EC/1.13.11.18 ec-1.13.11.18]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ATP]][c] '''+''' 1 [[CPD-641]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[DELTA3-ISOPENTENYL-PP]][c] '''+''' 1 [[Pi]][c]
+
* 1 [[CPD-11281]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[GLUTATHIONE]][c] '''+''' 2 [[PROTON]][c] '''+''' 1 [[SO3]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ05356]]
+
* Gene: [[SJ18452]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-7391]], isoprene biosynthesis II (engineered):
 
−
** '''7''' reactions found over '''8''' reactions in the full pathway
 
−
* [[PWY-922]], mevalonate pathway I:
 
−
** '''7''' reactions found over '''7''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R08678 R08678]
 +
* METANETX-RXN : MNXR112193
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23733 23733]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12982 12982]
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R01121 R01121]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P32377 P32377]
 
−
** [http://www.uniprot.org/uniprot/Q9U2A1 Q9U2A1]
 
−
** [http://www.uniprot.org/uniprot/Q9U294 Q9U294]
 
−
** [http://www.uniprot.org/uniprot/O13963 O13963]
 
−
** [http://www.uniprot.org/uniprot/Q9M381 Q9M381]
 
−
** [http://www.uniprot.org/uniprot/O23722 O23722]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=diphosphomevalonate decarboxylase}}
+
{{#set: ec-number=ec-1.13.11.18}}
−
{{#set: ec-number=ec-4.1.1.33}}
 
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=2}}
+
{{#set: nb pathway associated=0}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Latest revision as of 11:23, 18 March 2021

Reaction RXN-13161

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

  • LIGAND-RXN:
  • METANETX-RXN : MNXR112193
  • RHEA:





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