Difference between revisions of "RXN-13186"

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(Created page with "Category:pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=P562-PWY P562-PWY] == * taxonomic-range: ** [http://metacyc.org/META/NEW-IMAGE?object=tax-4751 tax-47...")
 
(Created page with "Category:reaction == Reaction RXN-13186 == * direction: ** left-to-right * common-name: ** histone demethylase activity (h3-k36 specific) * ec-number: ** [http://enzyme.ex...")
 
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[[Category:pathway]]
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[[Category:reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=P562-PWY P562-PWY] ==
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== Reaction RXN-13186 ==
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* taxonomic-range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=tax-4751 tax-4751]
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** left-to-right
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** [http://metacyc.org/META/NEW-IMAGE?object=tax-2 tax-2]
 
 
* common-name:
 
* common-name:
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** myo-inositol degradation i
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** histone demethylase activity (h3-k36 specific)
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== Reaction(s) found ==
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* ec-number:
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* [[MYO-INOSITOL-2-DEHYDROGENASE-RXN]]
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** [http://enzyme.expasy.org/EC/1.14.11.27 ec-1.14.11.27]
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* [[RXN-2902]]
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== Reaction formula ==
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== Reaction(s) not found ==
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* 2 [[2-KETOGLUTARATE]][c] '''+''' 1 [[CPD-8900]][c] '''+''' 2 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[PROTON]][c] '''=>''' 2 [[CARBON-DIOXIDE]][c] '''+''' 2 [[FORMALDEHYDE]][c] '''+''' 1 [[Protein-L-lysine]][c] '''+''' 2 [[SUC]][c]
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* [http://metacyc.org/META/NEW-IMAGE?object=5-DEHYDRO-2-DEOXYGLUCONOKINASE-RXN 5-DEHYDRO-2-DEOXYGLUCONOKINASE-RXN]
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== Gene(s) associated with this reaction  ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-14149 RXN-14149]
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* Gene: [[SJ18735]]
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* [http://metacyc.org/META/NEW-IMAGE?object=MYO-INOSOSE-2-DEHYDRATASE-RXN MYO-INOSOSE-2-DEHYDRATASE-RXN]
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** Category: [[annotation]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-14150 RXN-14150]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* [http://metacyc.org/META/NEW-IMAGE?object=4.1.2.29-RXN 4.1.2.29-RXN]
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* Gene: [[SJ13421]]
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{{#set: taxonomic-range=tax-2|tax-4751}}
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** Category: [[annotation]]
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{{#set: common-name=myo-inositol degradation i}}
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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{{#set: nb reaction found=2}}
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* Gene: [[SJ05371]]
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{{#set: completion rate=0.29}}
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** Category: [[annotation]]
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{{#set: nb total reaction=7}}
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* Gene: [[SJ19354]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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* Gene: [[SJ00708]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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* Gene: [[SJ19102]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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== Pathway(s)  ==
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== Reconstruction information  ==
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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== External links  ==
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* METANETX-RXN : MNXR117940
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* RHEA:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=42033 42033]
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* LIGAND-RXN:
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** [http://www.genome.jp/dbget-bin/www_bget?R10056 R10056]
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{{#set: direction=left-to-right}}
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{{#set: common-name=histone demethylase activity (h3-k36 specific)}}
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{{#set: ec-number=ec-1.14.11.27}}
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{{#set: nb gene associated=6}}
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{{#set: nb pathway associated=0}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction comment=n.a}}
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{{#set: reconstruction source=saccharina_japonica_genome}}

Latest revision as of 11:25, 18 March 2021

Reaction RXN-13186

  • direction:
    • left-to-right
  • common-name:
    • histone demethylase activity (h3-k36 specific)
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

  • METANETX-RXN : MNXR117940
  • RHEA:
  • LIGAND-RXN:





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