Difference between revisions of "RXN-13202"

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(Created page with "Category:reaction == Reaction FPGFTh == * direction: ** reversible * common-name: ** 10-formyltetrahydrofolate:5'-phosphoribosylglycinamide formyltransferase, chloroplast...")
(Created page with "Category:reaction == Reaction RXN-13202 == * direction: ** left-to-right * common-name: ** ammonia-dependent carbamoyl-phosphate synthase * ec-number: ** [http://enzyme.ex...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction FPGFTh ==
+
== Reaction RXN-13202 ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
* common-name:
 
* common-name:
−
** 10-formyltetrahydrofolate:5'-phosphoribosylglycinamide formyltransferase, chloroplast
+
** ammonia-dependent carbamoyl-phosphate synthase
 +
* ec-number:
 +
** [http://enzyme.expasy.org/EC/6.3.4.16 ec-6.3.4.16]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1.0 [[10-FORMYL-THF]][h] '''+''' 1.0 [[5-PHOSPHO-RIBOSYL-GLYCINEAMIDE]][h] '''<=>''' 1.0 [[5-P-RIBOSYL-N-FORMYLGLYCINEAMIDE]][h] '''+''' 1.0 [[PROTON]][h] '''+''' 1.0 [[THF]][h]
+
* 1 [[AMMONIUM]][c] '''+''' 2 [[ATP]][c] '''+''' 1 [[HCO3]][c] '''=>''' 2 [[ADP]][c] '''+''' 1 [[CARBAMOYL-P]][c] '''+''' 2 [[PROTON]][c] '''+''' 1 [[Pi]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ06408]]
+
* Gene: [[SJ17851]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ15949]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-4984]], urea cycle:
 +
** '''5''' reactions found over '''5''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
+
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
{{#set: direction=reversible}}
+
* METANETX-RXN : MNXR96486
−
{{#set: common-name=10-formyltetrahydrofolate:5'-phosphoribosylglycinamide formyltransferase, chloroplast}}
+
* UNIPROT:
−
{{#set: nb gene associated=1}}
+
** [http://www.uniprot.org/uniprot/O15829 O15829]
−
{{#set: nb pathway associated=0}}
+
** [http://www.uniprot.org/uniprot/O15830 O15830]
−
{{#set: reconstruction category=orthology}}
+
** [http://www.uniprot.org/uniprot/P07756 P07756]
−
{{#set: reconstruction tool=pantograph}}
+
** [http://www.uniprot.org/uniprot/P31327 P31327]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R00149 R00149]
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18030 18030]
 +
{{#set: direction=left-to-right}}
 +
{{#set: common-name=ammonia-dependent carbamoyl-phosphate synthase}}
 +
{{#set: ec-number=ec-6.3.4.16}}
 +
{{#set: nb gene associated=2}}
 +
{{#set: nb pathway associated=1}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Latest revision as of 11:24, 18 March 2021

Reaction RXN-13202

  • direction:
    • left-to-right
  • common-name:
    • ammonia-dependent carbamoyl-phosphate synthase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-4984, urea cycle:
    • 5 reactions found over 5 reactions in the full pathway

Reconstruction information

External links





Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=RXN-13202&oldid=142785"