Difference between revisions of "RXN-13224"

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(Created page with "Category:reaction == Reaction CYSTEINE-DIOXYGENASE-RXN == * direction: ** left-to-right * common-name: ** cysteine dioxygenase * ec-number: ** [http://enzyme.expasy.org/EC...")
(Created page with "Category:reaction == Reaction RXN-13224 == * direction: ** left-to-right == Reaction formula == * 1 NN-dimethyl-terminal-XPK[c] '''+''' 1 S-ADENOSYLMETHIONINE[c] '...")
 
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction CYSTEINE-DIOXYGENASE-RXN ==
+
== Reaction RXN-13224 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
−
* common-name:
 
−
** cysteine dioxygenase
 
−
* ec-number:
 
−
** [http://enzyme.expasy.org/EC/1.13.11.20 ec-1.13.11.20]
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CYS]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[3-SULFINOALANINE]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[NN-dimethyl-terminal-XPK]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[NNN-trimethyl-terminal-XPK]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ14758]]
+
* Gene: [[SJ17434]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
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* Gene: [[SJ16671]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[CYSTEINE-DEG-PWY]], L-cysteine degradation I:
 
−
** '''2''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-5331]], taurine biosynthesis I:
 
−
** '''1''' reactions found over '''5''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* METANETX-RXN : MNXR96993
 
−
* RHEA:
 
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20442 20442]
 
−
* LIGAND-RXN:
 
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** [http://www.genome.jp/dbget-bin/www_bget?R00893 R00893]
 
−
* UNIPROT:
 
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** [http://www.uniprot.org/uniprot/P21816 P21816]
 
−
** [http://www.uniprot.org/uniprot/Q16878 Q16878]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=cysteine dioxygenase}}
+
{{#set: nb gene associated=1}}
−
{{#set: ec-number=ec-1.13.11.20}}
+
{{#set: nb pathway associated=0}}
−
{{#set: nb gene associated=2}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: nb pathway associated=2}}
+
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction category=orthology|annotation}}
 
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|output_pantograph_nannochloropsis_salina|saccharina_japonica_genome}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Latest revision as of 11:20, 18 March 2021

Reaction RXN-13224

  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

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