Difference between revisions of "RXN-13227"

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(Created page with "Category:reaction == Reaction 4-HYDROXYPHENYLPYRUVATE-DIOXYGENASE-RXN == * direction: ** left-to-right * common-name: ** 4-hydroxyphenylpyruvate dioxygenase * ec-number: *...")
(Created page with "Category:reaction == Reaction RXN-13227 == * direction: ** left-to-right == Reaction formula == * 1 N-terminal-PPK[c] '''+''' 1 S-ADENOSYLMETHIONINE[c] '''=>''' 1...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
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== Reaction 4-HYDROXYPHENYLPYRUVATE-DIOXYGENASE-RXN ==
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== Reaction RXN-13227 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
−
* common-name:
 
−
** 4-hydroxyphenylpyruvate dioxygenase
 
−
* ec-number:
 
−
** [http://enzyme.expasy.org/EC/1.13.11.27 ec-1.13.11.27]
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[P-HYDROXY-PHENYLPYRUVATE]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[HOMOGENTISATE]][c]
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* 1 [[N-terminal-PPK]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[N-methyl-terminal-PPK]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ08954]]
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* Gene: [[SJ17434]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* Gene: [[SJ08953]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-7432]], L-phenylalanine biosynthesis III (cytosolic, plants):
 
−
** '''3''' reactions found over '''2''' reactions in the full pathway
 
−
* [[TYRFUMCAT-PWY]], L-tyrosine degradation I:
 
−
** '''2''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-1581]], plastoquinol-9 biosynthesis I:
 
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** '''3''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-1422]], vitamin E biosynthesis (tocopherols):
 
−
** '''5''' reactions found over '''7''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
* METANETX-RXN : MNXR117955
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16190 16190]
 
−
* LIGAND-RXN:
 
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** [http://www.genome.jp/dbget-bin/www_bget?R02521 R02521]
 
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* UNIPROT:
 
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** [http://www.uniprot.org/uniprot/P32754 P32754]
 
−
** [http://www.uniprot.org/uniprot/Q02110 Q02110]
 
−
** [http://www.uniprot.org/uniprot/P32755 P32755]
 
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** [http://www.uniprot.org/uniprot/O48604 O48604]
 
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** [http://www.uniprot.org/uniprot/O23920 O23920]
 
−
** [http://www.uniprot.org/uniprot/P93836 P93836]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=4-hydroxyphenylpyruvate dioxygenase}}
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{{#set: nb gene associated=1}}
−
{{#set: ec-number=ec-1.13.11.27}}
+
{{#set: nb pathway associated=0}}
−
{{#set: nb gene associated=2}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: nb pathway associated=4}}
+
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction category=annotation|orthology}}
 
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Latest revision as of 11:18, 18 March 2021

Reaction RXN-13227

  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

  • METANETX-RXN : MNXR117955




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