Difference between revisions of "RXN-13279"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction 1.3.7.4-RXN == * direction: ** left-to-right * common-name: ** phytochromobilin:ferredoxin oxidoreductase * ec-number: ** [http://enzyme.expa...")
(Created page with "Category:reaction == Reaction RXN-13279 == * direction: ** reversible * common-name: ** acetoacetyl-coa reductase * ec-number: ** [http://enzyme.expasy.org/EC/1.1.1.36 ec-...")
 
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction 1.3.7.4-RXN ==
+
== Reaction RXN-13279 ==
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
 
* common-name:
 
* common-name:
−
** phytochromobilin:ferredoxin oxidoreductase
+
** acetoacetyl-coa reductase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.3.7.4 ec-1.3.7.4]
+
** [http://enzyme.expasy.org/EC/1.1.1.36 ec-1.1.1.36]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[BILIVERDINE]][c] '''+''' 2 [[PROTON]][c] '''+''' 2 [[Reduced-ferredoxins]][c] '''=>''' 1 [[3Z-PHYTOCHROMOBILIN]][c] '''+''' 2 [[Oxidized-ferredoxins]][c]
+
* 1 [[D-3-HYDROXYACYL-COA]][c] '''+''' 1 [[NADP]][c] '''<=>''' 1 [[3-KETOACYL-COA]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ04581]]
+
* Gene: [[SJ01444]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
** Category: [[orthology]]
+
* Gene: [[SJ06969]]
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
** Category: [[annotation]]
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-7170]], phytochromobilin biosynthesis:
 
−
** '''2''' reactions found over '''3''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
* METANETX-RXN : MNXR108333
 
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16379 16379]
 
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R03678 R03678]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01779 R01779]
−
{{#set: direction=left-to-right}}
+
* METANETX-RXN : MNXR107165
−
{{#set: common-name=phytochromobilin:ferredoxin oxidoreductase}}
+
{{#set: direction=reversible}}
−
{{#set: ec-number=ec-1.3.7.4}}
+
{{#set: common-name=acetoacetyl-coa reductase}}
−
{{#set: nb gene associated=1}}
+
{{#set: ec-number=ec-1.1.1.36}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb gene associated=2}}
−
{{#set: reconstruction category=orthology|annotation}}
+
{{#set: nb pathway associated=0}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Latest revision as of 11:18, 18 March 2021

Reaction RXN-13279

  • direction:
    • reversible
  • common-name:
    • acetoacetyl-coa reductase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

  • LIGAND-RXN:
  • METANETX-RXN : MNXR107165





Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=RXN-13279&oldid=140178"