Difference between revisions of "RXN-13290"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=HEME-OXYGENASE-DECYCLIZING-RXN HEME-OXYGENASE-DECYCLIZING-RXN] == * direction: ** left-to-right * c...")
(Created page with "Category:reaction == Reaction RXN-13290 == * direction: ** left-to-right * common-name: ** 15-tetracosenoate—coa ligase ** acyl-coa synthetase ** long-chain fatty ac...")
 
(8 intermediate revisions by 4 users not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=HEME-OXYGENASE-DECYCLIZING-RXN HEME-OXYGENASE-DECYCLIZING-RXN] ==
+
== Reaction RXN-13290 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** heme oxygenase (decyclizing)
+
** 15-tetracosenoate—coa ligase
 +
** acyl-coa synthetase
 +
** long-chain fatty acid-coa ligase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.14.14.18 ec-1.14.14.18]
+
** [http://enzyme.expasy.org/EC/6.2.1.3 ec-6.2.1.3]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 3 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[PROTOHEME]][c] '''+''' 2 [[PROTON]][c] '''+''' 3 [[Red-NADPH-Hemoprotein-Reductases]][c] '''=>''' 1 [[BILIVERDINE]][c] '''+''' 1 [[CARBON-MONOXIDE]][c] '''+''' 1 [[FE+2]][c] '''+''' 3 [[Ox-NADPH-Hemoprotein-Reductases]][c] '''+''' 3 [[WATER]][c]
+
* 1 [[ATP]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[CPD-14268]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[CPD-14269]][c] '''+''' 1 [[PPI]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ20370]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* Gene: [[SJ08690]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ03650]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ08691]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ13972]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ05591]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ08692]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
</div>
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-5874]], heme degradation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5874 PWY-5874]
 
−
** '''1''' reactions found over '''6''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
* METANETX-RXN : MNXR117999
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21765 21765]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R00311 R00311]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P23711 P23711]
 
−
** [http://www.uniprot.org/uniprot/P14901 P14901]
 
−
** [http://www.uniprot.org/uniprot/P30519 P30519]
 
−
** [http://www.uniprot.org/uniprot/P06762 P06762]
 
−
** [http://www.uniprot.org/uniprot/P09601 P09601]
 
−
** [http://www.uniprot.org/uniprot/Q7M338 Q7M338]
 
−
** [http://www.uniprot.org/uniprot/P14791 P14791]
 
−
** [http://www.uniprot.org/uniprot/P32394 P32394]
 
−
** [http://www.uniprot.org/uniprot/P72849 P72849]
 
−
** [http://www.uniprot.org/uniprot/P74133 P74133]
 
−
** [http://www.uniprot.org/uniprot/Q9RKR1 Q9RKR1]
 
−
** [http://www.uniprot.org/uniprot/O48782 O48782]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=heme oxygenase (decyclizing)}}
+
{{#set: common-name=15-tetracosenoate&mdash;coa ligase|acyl-coa synthetase|long-chain fatty acid-coa ligase}}
−
{{#set: ec-number=ec-1.14.14.18}}
+
{{#set: ec-number=ec-6.2.1.3}}
−
{{#set: nb gene associated=1}}
+
{{#set: nb gene associated=6}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=0}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Latest revision as of 11:18, 18 March 2021

Reaction RXN-13290

  • direction:
    • left-to-right
  • common-name:
    • 15-tetracosenoate—coa ligase
    • acyl-coa synthetase
    • long-chain fatty acid-coa ligase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

  • METANETX-RXN : MNXR117999





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