Difference between revisions of "RXN-13301"

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(Created page with "Category:reaction == Reaction RXN-13406 == * direction: ** left-to-right * common-name: ** dimethylglycine n-methyltransferase * ec-number: ** [http://enzyme.expasy.org/EC...")
(Created page with "Category:reaction == Reaction RXN-7659 == * direction: ** reversible * common-name: ** dihydrogeranylgeranyl diphosphate reductase == Reaction formula == * 1 CPD-7003[...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-13406 ==
+
== Reaction RXN-7659 ==
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
 
* common-name:
 
* common-name:
−
** dimethylglycine n-methyltransferase
+
** dihydrogeranylgeranyl diphosphate reductase
−
* ec-number:
 
−
** [http://enzyme.expasy.org/EC/2.1.1.162 ec-2.1.1.162]
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[GLY]][c] '''+''' 3 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 3 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[BETAINE]][c] '''+''' 3 [[PROTON]][c]
+
* 1 [[CPD-7003]][c] '''+''' 1 [[NADP]][c] '''<=>''' 1 [[CPD-7002]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* Gene: [[SJ15264]]
−
* Gene: [[SJ12118]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ12128]]
+
** Category: [[orthology]]
−
** Category: [[annotation]]
+
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ12119]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ12116]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ03081]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ02539]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ14716]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ10116]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ18177]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ02540]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ11087]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
</div>
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-5063]], phytyl diphosphate biosynthesis:
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R10062 R10062]
+
** [http://www.genome.jp/dbget-bin/www_bget?R08755 R08755]
−
* RHEA:
+
{{#set: direction=reversible}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=32478 32478]
+
{{#set: common-name=dihydrogeranylgeranyl diphosphate reductase}}
−
{{#set: direction=left-to-right}}
+
{{#set: nb gene associated=1}}
−
{{#set: common-name=dimethylglycine n-methyltransferase}}
+
{{#set: nb pathway associated=1}}
−
{{#set: ec-number=ec-2.1.1.162}}
+
{{#set: reconstruction category=annotation|orthology}}
−
{{#set: nb gene associated=11}}
+
{{#set: reconstruction tool=pathwaytools|pantograph}}
−
{{#set: nb pathway associated=0}}
 
−
{{#set: reconstruction category=annotation}}
 
−
{{#set: reconstruction tool=pathwaytools}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}

Revision as of 19:02, 14 January 2021

Reaction RXN-7659

  • direction:
    • reversible
  • common-name:
    • dihydrogeranylgeranyl diphosphate reductase

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-5063, phytyl diphosphate biosynthesis:
    • 3 reactions found over 3 reactions in the full pathway

Reconstruction information

External links





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