Difference between revisions of "RXN-13303"

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(Created page with "Category:reaction == Reaction RXN3O-102 == * direction: ** left-to-right * common-name: ** 3-demethylubiquinol-6 3-o-methyltransferase ** s-adenosyl-l-methionine:2-hexapre...")
(Created page with "Category:reaction == Reaction RXN3DJ-25 == * direction: ** left-to-right * common-name: ** sphingosine-1-phosphate phosphatase == Reaction formula == * 1 CPD3DJ-11366[...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN3O-102 ==
+
== Reaction RXN3DJ-25 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** 3-demethylubiquinol-6 3-o-methyltransferase
+
** sphingosine-1-phosphate phosphatase
−
** s-adenosyl-l-methionine:2-hexaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4-benzoquinol o-methyltransferase
 
−
* ec-number:
 
−
** [http://enzyme.expasy.org/EC/2.1.1.64 ec-2.1.1.64]
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[2-HEXAPRENYL-3-METHYL-5-HYDROXY-6-METHOX]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[UBIQUINOL-30]][c]
+
* 1 [[CPD3DJ-11366]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[Pi]][c] '''+''' 1 [[SPHINGOSINE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ13007]]
+
* Gene: [[SJ19405]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* Gene: [[SJ16864]]
+
** Category: [[orthology]]
−
** Category: [[annotation]]
+
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY3O-19]], ubiquinol-6 biosynthesis from 4-hydroxybenzoate (eukaryotic):
+
* [[PWY3DJ-11470]], sphingosine and sphingosine-1-phosphate metabolism:
−
** '''4''' reactions found over '''8''' reactions in the full pathway
 
−
* [[PWY-7230]], ubiquinol-6 biosynthesis from 4-aminobenzoate (yeast):
 
−
** '''3''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-7233]], ubiquinol-6 bypass biosynthesis (eukaryotic):
 
 
** '''3''' reactions found over '''10''' reactions in the full pathway
 
** '''3''' reactions found over '''10''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=44401 44401]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27519 27519]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R02175 R02175]
+
** [http://www.genome.jp/dbget-bin/www_bget?R06521 R06521]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=3-demethylubiquinol-6 3-o-methyltransferase|s-adenosyl-l-methionine:2-hexaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4-benzoquinol o-methyltransferase}}
+
{{#set: common-name=sphingosine-1-phosphate phosphatase}}
−
{{#set: ec-number=ec-2.1.1.64}}
+
{{#set: nb gene associated=1}}
−
{{#set: nb gene associated=2}}
+
{{#set: nb pathway associated=1}}
−
{{#set: nb pathway associated=3}}
+
{{#set: reconstruction category=annotation|orthology}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction tool=pathwaytools|pantograph}}
−
{{#set: reconstruction tool=pathwaytools}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}

Revision as of 11:26, 15 January 2021

Reaction RXN3DJ-25

  • direction:
    • left-to-right
  • common-name:
    • sphingosine-1-phosphate phosphatase

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY3DJ-11470, sphingosine and sphingosine-1-phosphate metabolism:
    • 3 reactions found over 10 reactions in the full pathway

Reconstruction information

External links





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