Difference between revisions of "RXN-13403"

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(Created page with "Category:reaction == Reaction RXN-16622 == * direction: ** left-to-right * common-name: ** 3-oxoacyl-[acyl-carrier-protein] reductase (nadph) ** (7z)-3-oxo-hexadec-7-enoyl...")
(Created page with "Category:reaction == Reaction RXN-11480 == * direction: ** left-to-right * common-name: ** 3-oxo-pimeloyl-[acp] methyl ester reductase ** 3-oxoacyl-[acyl-carrier-protein]...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-16622 ==
+
== Reaction RXN-11480 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
 +
** 3-oxo-pimeloyl-[acp] methyl ester reductase
 
** 3-oxoacyl-[acyl-carrier-protein] reductase (nadph)
 
** 3-oxoacyl-[acyl-carrier-protein] reductase (nadph)
−
** (7z)-3-oxo-hexadec-7-enoyl-[acp] reductase
 
 
* ec-number:
 
* ec-number:
 
** [http://enzyme.expasy.org/EC/1.1.1.100 ec-1.1.1.100]
 
** [http://enzyme.expasy.org/EC/1.1.1.100 ec-1.1.1.100]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[7Z-3-oxo-hexadec-7-enoyl-ACPs]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[3R-7Z-3-hydroxy-hexadec-7-enoyl-ACPs]][c] '''+''' 1 [[NADP]][c]
+
* 1 [[3-Ketopimeloyl-ACP-methyl-esters]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[3-hydroxypimeloyl-ACP-methyl-esters]][c] '''+''' 1 [[NADP]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
 
* Gene: [[SJ17743]]
 
* Gene: [[SJ17743]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ04229]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[SJ13014]]
 
* Gene: [[SJ13014]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
Line 19: Line 22:
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ04229]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-7664]], oleate biosynthesis IV (anaerobic):
+
* [[PWY-6519]], 8-amino-7-oxononanoate biosynthesis I:
−
** '''13''' reactions found over '''14''' reactions in the full pathway
+
** '''9''' reactions found over '''11''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R10120 R10120]
 +
* METANETX-RXN : MNXR113493
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=(7z)-3-oxo-hexadec-7-enoyl-[acp] reductase|3-oxoacyl-[acyl-carrier-protein] reductase (nadph)}}
+
{{#set: common-name=3-oxoacyl-[acyl-carrier-protein] reductase (nadph)|3-oxo-pimeloyl-[acp] methyl ester reductase}}
 
{{#set: ec-number=ec-1.1.1.100}}
 
{{#set: ec-number=ec-1.1.1.100}}
 
{{#set: nb gene associated=3}}
 
{{#set: nb gene associated=3}}
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Revision as of 08:38, 15 March 2021

Reaction RXN-11480

  • direction:
    • left-to-right
  • common-name:
    • 3-oxo-pimeloyl-[acp] methyl ester reductase
    • 3-oxoacyl-[acyl-carrier-protein] reductase (nadph)
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6519, 8-amino-7-oxononanoate biosynthesis I:
    • 9 reactions found over 11 reactions in the full pathway

Reconstruction information

External links

  • LIGAND-RXN:
  • METANETX-RXN : MNXR113493
  • Property "Common-name" (as page type) with input value "3-oxoacyl-[acyl-carrier-protein] reductase (nadph)" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
  • Property "Common-name" (as page type) with input value "3-oxo-pimeloyl-[acp] methyl ester reductase" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.




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