Difference between revisions of "RXN-13404"

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(Created page with "Category:reaction == Reaction RXN-902 == * direction: ** left-to-right * common-name: ** phenylitaconyl-coa hydratase ** enoyl-coa hydratase * ec-number: ** [http://enzyme...")
(Created page with "Category:reaction == Reaction 2.4.2.38-RXN == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/2.4.2.38 ec-2.4.2.38] == Reaction formula == * 1 [...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-902 ==
+
== Reaction 2.4.2.38-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
−
* common-name:
 
−
** phenylitaconyl-coa hydratase
 
−
** enoyl-coa hydratase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/4.2.1.17 ec-4.2.1.17]
+
** [http://enzyme.expasy.org/EC/2.4.2.38 ec-2.4.2.38]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[E-PHENYLITACONYL-COA]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CARBOXYMETHYL-HYDROXYPHENYLPROPCOA]][c]
+
* 1 [[2-2-N-linked-Glycan]][c] '''+''' 1 [[UDP-D-XYLOSE]][c] '''=>''' 1 [[N4-N-ACETYL-BETA-D-GLUCOSAMINYL-X]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[UDP]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* Gene: [[SJ17017]]
−
* Gene: [[SJ10275]]
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ03913]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ03584]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ14591]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ21390]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ07211]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
</div>
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-81]], toluene degradation to benzoyl-CoA (anaerobic):
+
* [[PWY-7920]], complex N-linked glycan biosynthesis (plants):
−
** '''2''' reactions found over '''6''' reactions in the full pathway
+
** '''2''' reactions found over '''11''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R05599 R05599]
+
** [http://www.genome.jp/dbget-bin/www_bget?R06016 R06016]
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10612 10612]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=phenylitaconyl-coa hydratase|enoyl-coa hydratase}}
+
{{#set: ec-number=ec-2.4.2.38}}
−
{{#set: ec-number=ec-4.2.1.17}}
+
{{#set: nb gene associated=1}}
−
{{#set: nb gene associated=6}}
 
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus}}

Revision as of 19:02, 14 January 2021

Reaction 2.4.2.38-RXN

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7920, complex N-linked glycan biosynthesis (plants):
    • 2 reactions found over 11 reactions in the full pathway

Reconstruction information

External links





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