Difference between revisions of "RXN-13404"

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(Created page with "Category:reaction == Reaction 2.4.2.38-RXN == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/2.4.2.38 ec-2.4.2.38] == Reaction formula == * 1 [...")
(Created page with "Category:reaction == Reaction RXN-12413 == * direction: ** left-to-right * common-name: ** phytoene desaturase (3,4-didehydrolycopene-forming) * ec-number: ** [http://enzy...")
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction 2.4.2.38-RXN ==
+
== Reaction RXN-12413 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 +
* common-name:
 +
** phytoene desaturase (3,4-didehydrolycopene-forming)
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/2.4.2.38 ec-2.4.2.38]
+
** [http://enzyme.expasy.org/EC/1.3.99.30 ec-1.3.99.30]
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[2-2-N-linked-Glycan]][c] '''+''' 1 [[UDP-D-XYLOSE]][c] '''=>''' 1 [[N4-N-ACETYL-BETA-D-GLUCOSAMINYL-X]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[UDP]][c]
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* 5 [[Acceptor]][c] '''+''' 1 [[CPD-12321]][c] '''=>''' 1 [[CPD-12932]][c] '''+''' 5 [[Donor-H2]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ17017]]
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* Gene: [[SJ18358]]
** Category: [[orthology]]
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** Category: [[annotation]]
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY-7920]], complex N-linked glycan biosynthesis (plants):
 
** '''2''' reactions found over '''11''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 
* LIGAND-RXN:
 
* LIGAND-RXN:
** [http://www.genome.jp/dbget-bin/www_bget?R06016 R06016]
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** [http://www.genome.jp/dbget-bin/www_bget?R09703 R09703]
 
* RHEA:
 
* RHEA:
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10612 10612]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30978 30978]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: ec-number=ec-2.4.2.38}}
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{{#set: common-name=phytoene desaturase (3,4-didehydrolycopene-forming)}}
 +
{{#set: ec-number=ec-1.3.99.30}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=0}}
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction category=annotation}}
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 11:23, 15 January 2021

Reaction RXN-12413

  • direction:
    • left-to-right
  • common-name:
    • phytoene desaturase (3,4-didehydrolycopene-forming)
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links